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Gene Card

Best human hits

PSMA5; PSMA7; PSMA8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007056

Gene Model ID

KH2012:KH.C5.191

Location

KhC5:1986999..1989475

Transcript Models and Sequences

  KH2012:KH.C5.191.v1.A.SL1-1
KH2012:KH.C5.191.v1.A.SL2-1
KH2012:KH.C5.191.v2.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000009332
NCBI Reference Sequence XM_002127263.4
Collections

Gateway full ORF

2 results

cima85848

Plate: VES57_G03

cima897440

Plate: VES72_H05

Gene collection 1 (N. Satoh)

2 results

cicl051h10

Plate: R1CiGC14a23

cicl049d21

Plate: R1CiGC13p19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Proteasome_alpha-type ProSiteProfiles Proteasome alpha-type subunit
Proteasome_sua/b Pfam Proteasome, subunit alpha/beta
Proteasome_alpha_type_5 CDD Proteasome subunit alpha5
Ntn_hydrolases_N SUPERFAMILY Nucleophile aminohydrolases, N-terminal
Ntn_hydrolases_N Gene3D Nucleophile aminohydrolases, N-terminal
Proteasome_asu_N ProSitePatterns Proteasome alpha-subunit, N-terminal domain
Proteasome_asu_N Pfam Proteasome alpha-subunit, N-terminal domain
Proteasome_asu_N SMART Proteasome alpha-subunit, N-terminal domain

GOSlim

38 results

GO Term Annotation Origin Type
protein polyubiquitination Orthology biological process
endopeptidase activity Orthology molecular function
protein binding Orthology molecular function
extracellular region Orthology cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
proteolysis Orthology biological process
peptidase activity Orthology molecular function
hydrolase activity Orthology molecular function
identical protein binding Blast molecular function
transmembrane transport Orthology biological process
extracellular exosome Orthology cellular component
negative regulation of canonical Wnt signaling pathway Orthology biological process
positive regulation of canonical Wnt signaling pathway Orthology biological process
postsynapse Blast cellular component
intracellular signal transduction Orthology biological process
protein phosphorylation Orthology biological process
intracellular part Orthology cellular component
macromolecular complex Orthology cellular component
G2/M transition of mitotic cell cycle Orthology biological process
peptidase activity, acting on L-amino acid peptides Orthology molecular function
cytokine-mediated signaling pathway Orthology biological process
intracellular organelle part Orthology cellular component
cytoplasmic vesicle Orthology cellular component
endomembrane system Orthology cellular component
intracellular organelle lumen Orthology cellular component
transcription factor activity, sequence-specific DNA binding Orthology molecular function
cell surface receptor signaling pathway Orthology biological process
immune response Orthology biological process
mRNA catabolic process Orthology biological process
cellular protein modification process Orthology biological process
cell-cell signaling Orthology biological process
anatomical structure morphogenesis Orthology biological process
animal organ development Orthology biological process
immune system process Orthology biological process
cell differentiation Orthology biological process

GO (Orthology)

39 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
MAPK cascade Hs biological process
protein polyubiquitination Hs biological process
proteasome complex Hs cellular component
endopeptidase activity Hs molecular function
threonine-type endopeptidase activity Hs molecular function
protein binding Hs molecular function
extracellular region Hs cellular component
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
proteasome core complex Hs cellular component
proteolysis Hs biological process
ubiquitin-dependent protein catabolic process Hs biological process
peptidase activity Hs molecular function
negative regulation of G2/M transition of mitotic cell cycle Hs biological process
protein deubiquitination Hs biological process
hydrolase activity Hs molecular function
proteasome core complex, alpha-subunit complex Hs cellular component
anaphase-promoting complex-dependent catabolic process Hs biological process
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process Hs biological process
tumor necrosis factor-mediated signaling pathway Hs biological process
secretory granule lumen Hs cellular component
NIK/NF-kappaB signaling Hs biological process
Fc-epsilon receptor signaling pathway Hs biological process
proteasome-mediated ubiquitin-dependent protein catabolic process Hs biological process
regulation of mRNA stability Hs biological process
post-translational protein modification Hs biological process
T cell receptor signaling pathway Hs biological process
negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle Hs biological process
proteolysis involved in cellular protein catabolic process Hs biological process
transmembrane transport Hs biological process
Wnt signaling pathway, planar cell polarity pathway Hs biological process
extracellular exosome Hs cellular component
interleukin-1-mediated signaling pathway Hs biological process
negative regulation of canonical Wnt signaling pathway Hs biological process
positive regulation of canonical Wnt signaling pathway Hs biological process
regulation of hematopoietic stem cell differentiation Hs biological process
ficolin-1-rich granule lumen Hs cellular component

GO (Blast)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
proteasome complex Hs cellular component 399 7.89e-143
endopeptidase activity Hs molecular function 399 7.89e-143
threonine-type endopeptidase activity Hs molecular function 399 7.89e-143
protein binding Hs molecular function 399 7.89e-143
extracellular region Hs cellular component 399 7.89e-143
nucleus Hs cellular component 399 7.89e-143
nucleoplasm Hs cellular component 399 7.89e-143
cytoplasm Hs cellular component 399 7.89e-143
cytosol Hs cellular component 399 7.89e-143
proteasome core complex Hs cellular component 399 7.89e-143
peptidase activity Hs molecular function 399 7.89e-143
hydrolase activity Hs molecular function 399 7.89e-143
proteasome core complex, alpha-subunit complex Hs cellular component 399 7.89e-143
secretory granule lumen Hs cellular component 399 7.89e-143
identical protein binding Hs molecular function 164 2.91e-50
extracellular exosome Hs cellular component 399 7.89e-143
postsynapse Hs cellular component 164 2.91e-50
ficolin-1-rich granule lumen Hs cellular component 399 7.89e-143
spermatoproteasome complex Hs cellular component 155 7.95e-47

GO (InterProScan)

7 results

GO Term Analysis Type e-value
endopeptidase activity Pfam molecular function 1.4E-13
threonine-type endopeptidase activity Pfam molecular function 4.3E-58
proteasome core complex Pfam cellular component 4.3E-58
ubiquitin-dependent protein catabolic process Pfam biological process 1.4E-13
proteasome core complex, alpha-subunit complex CDD cellular component 2.67467E-144
proteasome-mediated ubiquitin-dependent protein catabolic process CDD biological process 2.67467E-144
proteolysis involved in cellular protein catabolic process Pfam biological process 4.3E-58

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