Aniseed - Gene card

Gene Card

Best human hits

OGT; TMTC1; TMTC4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007099

Gene Model ID

KH2012:KH.C5.23

Location

KhC5:1353748..1362181

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000006241
NCBI Reference Sequence	XM_009860267.2
NCBI Reference Sequence	XM_009860268.2

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

ciad018g13

Plate: R1CiGC02p18

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
TPR_repeat	Pfam	Tetratricopeptide repeat
TPR_repeat	ProSiteProfiles	Tetratricopeptide repeat
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
OGT/SEC/SPY_C	Pfam	O-GlcNAc transferase, C-terminal
TPR-like_helical_dom_sf	SUPERFAMILY	Tetratricopeptide-like helical domain superfamily
TPR_repeat	SMART	Tetratricopeptide repeat
TPR-contain_dom	ProSiteProfiles	Tetratricopeptide repeat-containing domain
OGT	PANTHER	UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit
TPR_1	Pfam	Tetratricopeptide repeat 1

GOSlim

32 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
apoptotic process	Orthology	biological process
signal transduction	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Blast	cellular component
transferase activity	Orthology	molecular function
macromolecular complex	Orthology	cellular component
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
nucleoplasm part	Orthology	cellular component
anion binding	Orthology	molecular function
oxidation-reduction process	Orthology	biological process
kinase activity	Orthology	molecular function
organelle organization	Orthology	biological process
cellular protein modification process	Orthology	biological process
binding	Orthology	molecular function
gene expression	Orthology	biological process
proteolysis	Orthology	biological process
peptidase activity, acting on L-amino acid peptides	Orthology	molecular function
protein ubiquitination	Orthology	biological process
response to organic substance	Orthology	biological process
regulation of gene expression	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
regulation of signal transduction	Orthology	biological process
cellular response to organic substance	Orthology	biological process
intracellular signal transduction	Orthology	biological process

GO (Orthology)

43 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
histone acetyltransferase complex	Hs	cellular component
protein binding	Hs	molecular function
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
regulation of glycolytic process	Hs	biological process
chromatin organization	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
protein glycosylation	Hs	biological process
protein O-linked glycosylation	Hs	biological process
apoptotic process	Hs	biological process
signal transduction	Hs	biological process
response to nutrient	Hs	biological process
lipid binding	Hs	molecular function
acetylglucosaminyltransferase activity	Hs	molecular function
membrane	Hs	cellular component
protein N-acetylglucosaminyltransferase activity	Hs	molecular function
protein processing	Hs	biological process
protein deubiquitination	Hs	biological process
transferase activity	Hs	molecular function
transferase activity, transferring glycosyl groups	Hs	molecular function
negative regulation of protein ubiquitination	Hs	biological process
negative regulation of proteasomal ubiquitin-dependent protein catabolic process	Hs	biological process
response to insulin	Hs	biological process
circadian regulation of gene expression	Hs	biological process
macromolecular complex	Hs	cellular component
histone H4-K5 acetylation	Hs	biological process
histone H4-K8 acetylation	Hs	biological process
histone H4-K16 acetylation	Hs	biological process
histone acetyltransferase activity (H4-K5 specific)	Hs	molecular function
histone acetyltransferase activity (H4-K8 specific)	Hs	molecular function
positive regulation of proteolysis	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
regulation of insulin receptor signaling pathway	Hs	biological process
histone acetyltransferase activity (H4-K16 specific)	Hs	molecular function
phosphatidylinositol-mediated signaling	Hs	biological process
rhythmic process	Hs	biological process
histone H3-K4 trimethylation	Hs	biological process
protein O-GlcNAc transferase activity	Hs	molecular function

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
histone acetyltransferase complex	Hs	cellular component	1692	0.0
protein binding	Hs	molecular function	1692	0.0
phosphatidylinositol-3,4,5-trisphosphate binding	Hs	molecular function	1692	0.0
nucleus	Hs	cellular component	1692	0.0
nucleoplasm	Hs	cellular component	1692	0.0
cytoplasm	Hs	cellular component	1692	0.0
mitochondrion	Hs	cellular component	1692	0.0
cytosol	Hs	cellular component	1692	0.0
plasma membrane	Hs	cellular component	1692	0.0
lipid binding	Hs	molecular function	1692	0.0
acetylglucosaminyltransferase activity	Hs	molecular function	1692	0.0
membrane	Hs	cellular component	1692	0.0
integral component of membrane	Hs	cellular component	128	5.95e-30
protein N-acetylglucosaminyltransferase activity	Hs	molecular function	1692	0.0
transferase activity	Hs	molecular function	1692	0.0
transferase activity, transferring glycosyl groups	Hs	molecular function	1692	0.0
macromolecular complex	Hs	cellular component	1692	0.0
histone acetyltransferase activity (H4-K5 specific)	Hs	molecular function	1692	0.0
histone acetyltransferase activity (H4-K8 specific)	Hs	molecular function	1692	0.0
histone acetyltransferase activity (H4-K16 specific)	Hs	molecular function	1692	0.0
protein O-GlcNAc transferase activity	Hs	molecular function	1692	0.0

GO (InterProScan)