Aniseed - Gene card

Gene Card

Best human hits

MRPL37; MRPS30

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007258

Gene Model ID

KH2012:KH.C5.380

Location

KhC5:4359718..4364103

Transcript Models and Sequences

KH2012:KH.C5.380.v1.A.ND1-1
KH2012:KH.C5.380.v1.A.nonSL2-1
KH2012:KH.C5.380.v1.A.nonSL3-1
KH2012:KH.C5.380.v1.A.SL4-1
KH2012:KH.C5.380.v2.A.SL5-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000009173
NCBI Reference Sequence	XM_002127629.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad060a16

Plate: R1CiGC06m13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
Ribosomal_L37/S30	Pfam	Ribosomal protein L37/S30

GOSlim

6 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
structural constituent of ribosome	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
ribosome	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component

GO (Orthology)

11 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
structural constituent of ribosome	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial ribosome	Hs	cellular component
mitochondrial large ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	144	5.83e-38
structural constituent of ribosome	Hs	molecular function	144	5.83e-38
mitochondrion	Hs	cellular component	144	5.83e-38
mitochondrial inner membrane	Hs	cellular component	144	5.83e-38
mitochondrial ribosome	Hs	cellular component	144	5.83e-38
mitochondrial large ribosomal subunit	Hs	cellular component	144	5.83e-38
ribosome	Hs	cellular component	144	5.83e-38
intracellular ribonucleoprotein complex	Hs	cellular component	144	5.83e-38

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	Pfam	molecular function	1.1E-6
mitochondrion	Pfam	cellular component	1.1E-6
ribosome	Pfam	cellular component	1.1E-6
translation	Pfam	biological process	1.1E-6