Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000002466
ENSEMBL	ENSCING00000020632
NCBI Reference Sequence	XM_002121039.1
NCBI Reference Sequence	XM_018811853.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad017f23

Plate: R1CiGC02h06

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
aa-tRNA-synth_I_CS	ProSitePatterns	Aminoacyl-tRNA synthetase, class I, conserved site
Ile-tRNA-ligase_type2	Hamap	Isoleucine-tRNA ligase, type 2
Val/Leu/Ile-tRNA-synth_edit	SUPERFAMILY	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
Val/Leu/Ile-tRNA-synth_edit	Gene3D	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain
aa-tRNA-synth_Ia	Pfam	Aminoacyl-tRNA synthetase, class Ia
M/V/L/I-tRNA-synth_anticd-bd	Pfam	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Ile-tRNA-ligase	TIGRFAM	Isoleucine-tRNA ligase
tRNAsynth_Ia_anticodon-bd	SUPERFAMILY	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
Rossmann-like_a/b/a_fold	Gene3D	Rossmann-like alpha/beta/alpha sandwich fold
Anticodon_Ile_ABEc	CDD	Isoleucyl tRNA synthetase type 2, anticodon-binding domain
Ile-tRNA-ligase	PRINTS	Isoleucine-tRNA ligase

GOSlim

17 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
mitochondrial matrix	Blast	cellular component
cytosol	Orthology	cellular component
membrane	Orthology	cellular component
ligase activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
RNA binding	Orthology	molecular function
cell differentiation	Orthology	biological process
RNA metabolic process	Orthology	biological process
hydrolase activity	Orthology	molecular function
intracellular part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
enzyme binding	Orthology	molecular function

GO (Orthology)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
tRNA binding	Hs	molecular function
nucleotide binding	Hs	molecular function
osteoblast differentiation	Hs	biological process
aminoacyl-tRNA editing activity	Hs	molecular function
aminoacyl-tRNA ligase activity	Hs	molecular function
isoleucine-tRNA ligase activity	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
translation	Hs	biological process
tRNA aminoacylation for protein translation	Hs	biological process
isoleucyl-tRNA aminoacylation	Hs	biological process
membrane	Hs	cellular component
ligase activity	Hs	molecular function
aminoacyl-tRNA synthetase multienzyme complex	Hs	cellular component
GTPase binding	Hs	molecular function
extracellular exosome	Hs	cellular component

GO (Blast)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
tRNA binding	Hs	molecular function	1587	0.0
nucleotide binding	Hs	molecular function	1587	0.0
aminoacyl-tRNA editing activity	Hs	molecular function	1587	0.0
aminoacyl-tRNA ligase activity	Hs	molecular function	1587	0.0
isoleucine-tRNA ligase activity	Hs	molecular function	1587	0.0
valine-tRNA ligase activity	Hs	molecular function	145	4.39e-35
protein binding	Hs	molecular function	1587	0.0
ATP binding	Hs	molecular function	1587	0.0
cytoplasm	Hs	cellular component	1587	0.0
mitochondrion	Hs	cellular component	276	9.50e-78
mitochondrial matrix	Hs	cellular component	276	9.50e-78
cytosol	Hs	cellular component	1587	0.0
membrane	Hs	cellular component	1587	0.0
ligase activity	Hs	molecular function	1587	0.0
aminoacyl-tRNA synthetase multienzyme complex	Hs	cellular component	1587	0.0
GTPase binding	Hs	molecular function	1587	0.0
extracellular exosome	Hs	cellular component	1587	0.0

GO (InterProScan)

9 results

GO Term	Analysis	Type	e-value
tRNA binding	CDD	molecular function	3.28384E-85
nucleotide binding	TIGRFAM	molecular function	3.0E-289
aminoacyl-tRNA editing activity	Gene3D	molecular function	9.4E-240
aminoacyl-tRNA ligase activity	Pfam	molecular function	5.7E-235
isoleucine-tRNA ligase activity	TIGRFAM	molecular function	3.0E-289
ATP binding	TIGRFAM	molecular function	3.0E-289
cytoplasm	TIGRFAM	cellular component	3.0E-289
tRNA aminoacylation for protein translation	Gene3D	biological process	9.4E-240
isoleucyl-tRNA aminoacylation	TIGRFAM	biological process	3.0E-289

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences