Aniseed - Gene card

Gene Card

Best human hits

TPK1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007648

Gene Model ID

KH2012:KH.C6.130

Location

KhC6:72830..73992

Transcript Models and Sequences

KH2012:KH.C6.130.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
NCBI Reference Sequence	XM_009860508.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb012n24

Plate: R1CiGC30b13

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
TPK_catalytic	CDD	Thiamin pyrophosphokinase, catalytic domain
Thiamin_PyroPKinase_B1-bd	Pfam	Thiamin pyrophosphokinase, thiamin-binding domain
Thi_PPkinase	TIGRFAM	Thiamin pyrophosphokinase
TPK_catalytic_sf	Gene3D	Thiamin pyrophosphokinase, catalytic domain superfamily
TPK_catalytic_sf	SUPERFAMILY	Thiamin pyrophosphokinase, catalytic domain superfamily
TPK_B1-bd_sf	SUPERFAMILY	Thiamin pyrophosphokinase, thiamin-binding domain superfamily
TPK_catalytic	Pfam	Thiamin pyrophosphokinase, catalytic domain

GOSlim

12 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
ATP binding	Orthology	molecular function
cytosol	Orthology	cellular component
kinase activity	Orthology	molecular function
phosphorylation	Orthology	biological process
transferase activity	Orthology	molecular function
transferase activity, transferring phosphorus-containing groups	Orthology	molecular function
cellular aromatic compound metabolic process	Orthology	biological process
phosphate-containing compound metabolic process	Orthology	biological process
small molecule binding	Orthology	molecular function
organic cyclic compound binding	Orthology	molecular function
heterocyclic compound binding	Orthology	molecular function

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
thiamine diphosphokinase activity	Hs	molecular function
ATP binding	Hs	molecular function
cytosol	Hs	cellular component
thiamine metabolic process	Hs	biological process
thiamine diphosphate biosynthetic process	Hs	biological process
kinase activity	Hs	molecular function
phosphorylation	Hs	biological process
transferase activity	Hs	molecular function
thiamine binding	Hs	molecular function

GO (Blast)