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Gene Card

Best human hits

PHB; PHB2

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007650

Gene Model ID

KH2012:KH.C6.132

Location

KhC6:333516..339411

Transcript Models and Sequences

  KH2012:KH.C6.132.v1.A.ND2-1
KH2012:KH.C6.132.v4.A.ND4-1
KH2012:KH.C6.132.v5.A.nonSL10-1
KH2012:KH.C6.132.v5.A.nonSL11-1
KH2012:KH.C6.132.v5.A.nonSL12-1
KH2012:KH.C6.132.v5.A.nonSL14-1
KH2012:KH.C6.132.v5.A.nonSL16-1
KH2012:KH.C6.132.v5.A.nonSL17-1
KH2012:KH.C6.132.v5.A.nonSL18-1
KH2012:KH.C6.132.v5.A.nonSL19-1
KH2012:KH.C6.132.v5.A.nonSL6-1
KH2012:KH.C6.132.v5.A.nonSL7-1
KH2012:KH.C6.132.v5.A.nonSL9-1
KH2012:KH.C6.132.v5.A.SL12-1
KH2012:KH.C6.132.v5.A.SL13-1
KH2012:KH.C6.132.v5.A.SL15-1
KH2012:KH.C6.132.v5.A.SL5-1
KH2012:KH.C6.132.v5.A.SL8-1
KH2012:KH.C6.132.v5.R.nonSL1-1
KH2012:KH.C6.132.v6.A.SL3-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000002532
Collections

Gateway full ORF

3 results

cien94804

Plate: VES85_I04

cien183662

Plate: VES98_F15

cien196701

Plate: VES100_G20

Gene collection 1 (N. Satoh)

1 result

cicl022j10

Plate: R1CiGC11i16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Prohibitin PANTHER Prohibitin
Band_7/SPFH_dom_sf SUPERFAMILY Band 7/SPFH domain superfamily
Band_7 Pfam Band 7 domain
Prohibitin CDD Prohibitin
Prohibitin PRINTS Prohibitin
Band_7 SMART Band 7 domain

GOSlim

48 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial inner membrane Orthology cellular component
early endosome Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
protein C-terminus binding Orthology molecular function
response to wounding Orthology biological process
cell surface Orthology cellular component
membrane Orthology cellular component
enzyme binding Blast molecular function
axon Orthology cellular component
macromolecular complex Orthology cellular component
negative regulation of apoptotic process Orthology biological process
myelin sheath Blast cellular component
transcription regulatory region DNA binding Blast molecular function
negative regulation of transcription, DNA-templated Orthology biological process
protein N-terminus binding Orthology molecular function
extracellular exosome Orthology cellular component
cell periphery Orthology cellular component
whole membrane Orthology cellular component
mitochondrial membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
metal ion transport Orthology biological process
transmembrane transport Orthology biological process
organelle organization Orthology biological process
nuclear lumen Orthology cellular component
receptor binding Orthology molecular function
transcription factor binding Orthology molecular function
mitotic cell cycle phase transition Orthology biological process
negative regulation of signal transduction Orthology biological process
response to lipid Orthology biological process
cellular response to organic substance Orthology biological process
binding Orthology molecular function
regulation of molecular function Orthology biological process
transcription factor activity, sequence-specific DNA binding Orthology molecular function
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process
response to hypoxia Orthology biological process
cellular response to stress Orthology biological process
cell cycle G1/S phase transition Orthology biological process

GO (Orthology)

35 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
protein import into nucleus, translocation Hs biological process
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial outer membrane Hs cellular component
mitochondrial inner membrane Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
mitochondrial calcium ion transmembrane transport Hs biological process
mitochondrion organization Hs biological process
sister chromatid cohesion Hs biological process
protein C-terminus binding Hs molecular function
response to wounding Hs biological process
cell surface Hs cellular component
membrane Hs cellular component
nuclear matrix Hs cellular component
estrogen receptor binding Hs molecular function
axon Hs cellular component
positive regulation of exit from mitosis Hs biological process
macromolecular complex Hs cellular component
negative regulation of intracellular estrogen receptor signaling pathway Hs biological process
amide binding Hs molecular function
negative regulation of apoptotic process Hs biological process
negative regulation of sequence-specific DNA binding transcription factor activity Hs biological process
negative regulation of transcription, DNA-templated Hs biological process
protein N-terminus binding Hs molecular function
protein stabilization Hs biological process
positive regulation of sequence-specific DNA binding transcription factor activity Hs biological process
extracellular exosome Hs cellular component
positive regulation of ERK1 and ERK2 cascade Hs biological process
cellular response to retinoic acid Hs biological process
cellular response to hypoxia Hs biological process
cell periphery Hs cellular component
positive regulation of cell cycle G1/S phase transition Hs biological process

GO (Blast)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 197 7.22e-63
complement component C3a binding Hs molecular function 197 7.22e-63
complement component C3b binding Hs molecular function 197 7.22e-63
protein binding Hs molecular function 315 1.13e-108
nucleus Hs cellular component 315 1.13e-108
nucleoplasm Hs cellular component 197 7.22e-63
cytoplasm Hs cellular component 315 1.13e-108
mitochondrion Hs cellular component 315 1.13e-108
mitochondrial outer membrane Hs cellular component 315 1.13e-108
mitochondrial inner membrane Hs cellular component 315 1.13e-108
early endosome Hs cellular component 197 7.22e-63
plasma membrane Hs cellular component 197 7.22e-63
integral component of plasma membrane Hs cellular component 197 7.22e-63
protein C-terminus binding Hs molecular function 315 1.13e-108
cell surface Hs cellular component 315 1.13e-108
membrane Hs cellular component 315 1.13e-108
nuclear matrix Hs cellular component 315 1.13e-108
enzyme binding Hs molecular function 197 7.22e-63
estrogen receptor binding Hs molecular function 315 1.13e-108
axon Hs cellular component 315 1.13e-108
proteinase activated receptor binding Hs molecular function 197 7.22e-63
macromolecular complex Hs cellular component 315 1.13e-108
amide binding Hs molecular function 315 1.13e-108
histone deacetylase binding Hs molecular function 197 7.22e-63
myelin sheath Hs cellular component 197 7.22e-63
transcription regulatory region DNA binding Hs molecular function 197 7.22e-63
protein N-terminus binding Hs molecular function 315 1.13e-108
extracellular exosome Hs cellular component 315 1.13e-108
cell periphery Hs cellular component 315 1.13e-108

GO (InterProScan)

1 result

GO Term Analysis Type e-value
membrane PANTHER cellular component 1.9E-94

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