Aniseed - Gene card

Gene Card

Best human hits

BCDIN3D; MEPCE

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007689

Gene Model ID

KH2012:KH.C6.168

Location

KhC6:7791..12926

Transcript Models and Sequences

KH2012:KH.C6.168.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000009453
ENSEMBL	ENSCING00000024274
NCBI Reference Sequence	XM_002129664.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb040d11

Plate: R1CiGC32h16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
BIN3_SAM-bd_dom	ProSiteProfiles	Bin3-type S-adenosyl-L-methionine binding domain
SAM-dependent_MTases	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferase
Bin3_C	Pfam	RNA methyltransferase bin3, C-terminal
Methyltranfer_dom	Pfam	Methyltransferase domain

GOSlim

12 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA binding	Orthology	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
transferase activity	Orthology	molecular function
RNA metabolic process	Orthology	biological process
metabolic process	Orthology	biological process
regulation of molecular function	Orthology	biological process
chromatin binding	Orthology	molecular function
G1/S transition of mitotic cell cycle	Orthology	biological process

GO (Orthology)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA methylation	Hs	biological process
RNA binding	Hs	molecular function
methyltransferase activity	Hs	molecular function
RNA methyltransferase activity	Hs	molecular function
S-adenosylmethionine-dependent methyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
methylation	Hs	biological process
negative regulation of chromatin binding	Hs	biological process
positive regulation of G1/S transition of mitotic cell cycle	Hs	biological process

GO (Blast)