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Gene Card

Best human hits

CRB2; NOTCH2; SVEP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007715

Gene Model ID

KH2012:KH.C6.192

Location

KhC6:1164797..1173431

Transcript Models and Sequences

  KH2012:KH.C6.192.v1.B.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000014777
ENSEMBL ENSCING00000018084
Collections

Gateway full ORF

1 result

cima810979

Plate: VES58_D01

Gene collection 1 (N. Satoh)

1 result

ciht012m13

Plate: R1CiGC43b03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

10 results

IPR Term Analysis Definition
EGF-type_Asp/Asn_hydroxyl_site ProSitePatterns EGF-type aspartate/asparagine hydroxylation site
Tyr-kin_ephrin_A/B_rcpt-like Pfam Tyrosine-protein kinase ephrin type A/B receptor-like
EGF_Ca-bd_CS ProSitePatterns EGF-like calcium-binding, conserved site
Tyr-kin_ephrin_A/B_rcpt-like SMART Tyrosine-protein kinase ephrin type A/B receptor-like
EGF-like_CS ProSitePatterns EGF-like, conserved site
EGF-like_dom ProSiteProfiles EGF-like domain
EGF-like_dom SMART EGF-like domain
Ig-like_fold Gene3D Immunoglobulin-like fold
EGF-like_dom Pfam EGF-like domain
EGF-like_Ca-bd_dom SMART EGF-like calcium-binding domain

GOSlim

22 results

GO Term Annotation Origin Type
Golgi membrane Blast cellular component
chromatin binding Blast molecular function
calcium ion binding Blast molecular function
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
nucleus Blast cellular component
nucleoplasm Blast cellular component
cytoplasm Blast cellular component
endoplasmic reticulum membrane Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
apical plasma membrane Blast cellular component
enzyme binding Blast molecular function
macromolecular complex Blast cellular component
membrane raft Blast cellular component
extracellular exosome Blast cellular component
endopeptidase activity Blast molecular function
enzyme regulator activity Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

24 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 123 2.56e-29
chromatin binding Hs molecular function 117 3.68e-27
receptor activity Hs molecular function 123 2.56e-29
calcium ion binding Hs molecular function 123 2.56e-29
protein binding Hs molecular function 123 2.56e-29
extracellular region Hs cellular component 123 2.56e-29
extracellular space Hs cellular component 117 3.68e-27
nucleus Hs cellular component 123 2.56e-29
nucleoplasm Hs cellular component 123 2.56e-29
cytoplasm Hs cellular component 123 2.56e-29
endoplasmic reticulum membrane Hs cellular component 123 2.56e-29
plasma membrane Hs cellular component 123 2.56e-29
integral component of plasma membrane Hs cellular component 123 2.56e-29
cell surface Hs cellular component 123 2.56e-29
membrane Hs cellular component 123 2.56e-29
integral component of membrane Hs cellular component 123 2.56e-29
apical plasma membrane Hs cellular component 118 7.17e-28
aspartic-type endopeptidase inhibitor activity Hs molecular function 118 7.17e-28
enzyme binding Hs molecular function 118 7.17e-28
macromolecular complex Hs cellular component 118 7.17e-28
transcription factor activity, ligand-activated RNA polymerase II transcription factor binding Hs molecular function 123 2.56e-29
receptor complex Hs cellular component 123 2.56e-29
membrane raft Hs cellular component 118 7.17e-28
extracellular exosome Hs cellular component 118 7.17e-28

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding SMART molecular function 4.4E-9

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