Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000025064
NCBI Reference Sequence	XM_002127530.4
NCBI Reference Sequence	XM_002127553.4

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cieg025c21

Plate: R1CiGC19f19

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
IF5A-like	TIGRFAM	Translation elongation factor IF5A-like
IF5A-like	PIRSF	Translation elongation factor IF5A-like
NA-bd_OB-fold	SUPERFAMILY	Nucleic acid-binding, OB-fold
Trans_elong_IF5A_hypusine_site	ProSitePatterns	Translation elongation factor, IF5A, hypusine site
Translation_prot_SH3-like_sf	SUPERFAMILY	Translation protein SH3-like domain superfamily
Transl_elong_IF5A_C	SMART	Translation elongation factor, IF5A C-terminal
Transl_elong_IF5A_C	Pfam	Translation elongation factor, IF5A C-terminal
IF5A-like	PANTHER	Translation elongation factor IF5A-like
Rib_L2_dom2	Gene3D	Ribosomal protein L2, domain 2

GOSlim

28 results

GO Term	Annotation Origin	Type
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
cytosol	Orthology	cellular component
apoptotic process	Orthology	biological process
spermatogenesis	Orthology	biological process
positive regulation of cell proliferation	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
protein N-terminus binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
regulation of gene expression	Orthology	biological process
nuclear outer membrane-endoplasmic reticulum membrane network	Orthology	cellular component
membrane region	Orthology	cellular component
nuclear envelope	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular protein transport	Orthology	biological process
gene expression	Orthology	biological process
intracellular transport	Orthology	biological process
biosynthetic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
positive regulation of gene expression	Orthology	biological process
organic substance transport	Orthology	biological process

GO (Orthology)

30 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA binding	Hs	molecular function
translation elongation factor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
annulate lamellae	Hs	cellular component
nuclear pore	Hs	cellular component
cytoplasm	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
cytosol	Hs	cellular component
mRNA export from nucleus	Hs	biological process
translation	Hs	biological process
translational elongation	Hs	biological process
translational frameshifting	Hs	biological process
protein export from nucleus	Hs	biological process
nucleocytoplasmic transport	Hs	biological process
apoptotic process	Hs	biological process
spermatogenesis	Hs	biological process
positive regulation of cell proliferation	Hs	biological process
peptidyl-lysine modification to peptidyl-hypusine	Hs	biological process
protein transport	Hs	biological process
membrane	Hs	cellular component
U6 snRNA binding	Hs	molecular function
ribosome binding	Hs	molecular function
intracellular membrane-bounded organelle	Hs	cellular component
positive regulation of translational elongation	Hs	biological process
positive regulation of translational termination	Hs	biological process
protein N-terminus binding	Hs	molecular function
mRNA transport	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA binding	Hs	molecular function	157	3.91e-50
translation elongation factor activity	Hs	molecular function	157	3.91e-50
protein binding	Hs	molecular function	157	3.91e-50
nucleus	Hs	cellular component	157	3.91e-50
annulate lamellae	Hs	cellular component	150	4.27e-47
nuclear pore	Hs	cellular component	157	3.91e-50
cytoplasm	Hs	cellular component	157	3.91e-50
endoplasmic reticulum	Hs	cellular component	157	3.91e-50
endoplasmic reticulum membrane	Hs	cellular component	157	3.91e-50
cytosol	Hs	cellular component	157	3.91e-50
membrane	Hs	cellular component	157	3.91e-50
U6 snRNA binding	Hs	molecular function	150	4.27e-47
ribosome binding	Hs	molecular function	157	3.91e-50
intracellular membrane-bounded organelle	Hs	cellular component	157	3.91e-50
protein N-terminus binding	Hs	molecular function	150	4.27e-47
extracellular exosome	Hs	cellular component	150	4.27e-47

GO (InterProScan)

6 results

GO Term	Analysis	Type	e-value
RNA binding	PANTHER	molecular function	5.1E-59
translation elongation factor activity	PANTHER	molecular function	5.1E-59
translational frameshifting	SMART	biological process	4.9E-15
ribosome binding	PANTHER	molecular function	5.1E-59
positive regulation of translational elongation	PANTHER	biological process	5.1E-59
positive regulation of translational termination	SMART	biological process	4.9E-15

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences