Aniseed - Gene card

Gene Card

Best human hits

AL359922.1; MTAP; PNP

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007814

Gene Model ID

KH2012:KH.C6.283

Location

KhC6:310284..311551

Transcript Models and Sequences

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000002546
NCBI Reference Sequence	XM_002131629.4
NCBI Reference Sequence	XM_018812257.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl060f02

Plate: R1CiGC15o03

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
MTAP	Hamap	Methylthioadenosine phosphorylase (MTAP)
Nucleoside_phosphorylase_d	Pfam	Nucleoside phosphorylase domain
Purine_phosphorylase-2_CS	ProSitePatterns	Purine phosphorylase, family 2, conserved site
MTAP	TIGRFAM	Methylthioadenosine phosphorylase (MTAP)
Nucleoside_phosphorylase_sf	SUPERFAMILY	Nucleoside phosphorylase superfamily
MTAP	PANTHER	Methylthioadenosine phosphorylase (MTAP)

GOSlim

23 results

GO Term	Annotation Origin	Type
nucleoside binding	Blast	molecular function
catalytic activity	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Blast	cellular component
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
cytoskeleton	Blast	cellular component
nucleobase-containing compound metabolic process	Orthology	biological process
transferase activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
cellular biosynthetic process	Orthology	biological process
metabolic process	Orthology	biological process
small molecule binding	Blast	molecular function
organic cyclic compound binding	Blast	molecular function
heterocyclic compound binding	Blast	molecular function
binding	Blast	molecular function
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
anion binding	Blast	molecular function

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
phosphorylase activity	Hs	molecular function
purine-nucleoside phosphorylase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
nucleobase-containing compound metabolic process	Hs	biological process
purine ribonucleoside salvage	Hs	biological process
nucleoside metabolic process	Hs	biological process
transferase activity	Hs	molecular function
transferase activity, transferring glycosyl groups	Hs	molecular function
transferase activity, transferring pentosyl groups	Hs	molecular function
S-methyl-5-thioadenosine phosphorylase activity	Hs	molecular function
L-methionine salvage from methylthioadenosine	Hs	biological process
methylation	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nucleoside binding	Hs	molecular function	60.8	1.08e-10
purine nucleobase binding	Hs	molecular function	60.8	1.08e-10
catalytic activity	Hs	molecular function	307	1.44e-104
phosphorylase activity	Hs	molecular function	307	1.44e-104
purine-nucleoside phosphorylase activity	Hs	molecular function	307	1.44e-104
protein binding	Hs	molecular function	307	1.44e-104
extracellular region	Hs	cellular component	60.8	1.08e-10
intracellular	Hs	cellular component	60.8	1.08e-10
nucleus	Hs	cellular component	307	1.44e-104
cytoplasm	Hs	cellular component	307	1.44e-104
cytosol	Hs	cellular component	307	1.44e-104
cytoskeleton	Hs	cellular component	60.8	1.08e-10
drug binding	Hs	molecular function	60.8	1.08e-10
transferase activity	Hs	molecular function	307	1.44e-104
transferase activity, transferring glycosyl groups	Hs	molecular function	307	1.44e-104
transferase activity, transferring pentosyl groups	Hs	molecular function	307	1.44e-104
S-methyl-5-thioadenosine phosphorylase activity	Hs	molecular function	307	1.44e-104
secretory granule lumen	Hs	cellular component	60.8	1.08e-10
phosphate ion binding	Hs	molecular function	60.8	1.08e-10
extracellular exosome	Hs	cellular component	307	1.44e-104
ficolin-1-rich granule lumen	Hs	cellular component	60.8	1.08e-10

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
catalytic activity	SUPERFAMILY	molecular function	9.46E-87
nucleoside metabolic process	SUPERFAMILY	biological process	9.46E-87
transferase activity, transferring pentosyl groups	ProSitePatterns	molecular function
S-methyl-5-thioadenosine phosphorylase activity	PANTHER	molecular function	8.7E-117