Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

RAB10; RAB8A; RAB8B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007870

Gene Model ID

KH2012:KH.C6.56

Location

KhC6:2016657..2020202

Transcript Models and Sequences

  KH2012:KH.C6.56.v1.A.ND3-3
KH2012:KH.C6.56.v1.A.SL1-3
KH2012:KH.C6.56.v2.A.SL1-2
KH2012:KH.C6.56.v2.A.SL2-2
KH2012:KH.C6.56.v3.A.SL1-1
KH2012:KH.C6.56.v3.A.SL2-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000022390
Collections

Gateway full ORF

2 results

cima81262

Plate: VES56_O07

cien142859

Plate: VES92_K14

Gene collection 1 (N. Satoh)

2 results

cicl002a09

Plate: R1CiGC08c22

cieg046p09

Plate: R1CiGC23g21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Small_GTPase Pfam Small GTPase superfamily
P-loop_NTPase SUPERFAMILY P-loop containing nucleoside triphosphate hydrolase
Small_GTP-bd_dom TIGRFAM Small GTP-binding protein domain

GOSlim

69 results

GO Term Annotation Origin Type
G2/M transition of mitotic cell cycle Orthology biological process
Golgi membrane Orthology cellular component
nucleotide binding Orthology molecular function
GTPase activity Orthology molecular function
receptor binding Blast molecular function
protein binding Orthology molecular function
GTP binding Orthology molecular function
nucleoplasm Blast cellular component
cytoplasm Orthology cellular component
mitochondrion Blast cellular component
endosome Orthology cellular component
endoplasmic reticulum Blast cellular component
endoplasmic reticulum membrane Blast cellular component
Golgi apparatus Orthology cellular component
centrosome Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
focal adhesion Blast cellular component
axonogenesis Orthology biological process
protein transport Orthology biological process
membrane Orthology cellular component
nuclear body Blast cellular component
protein kinase binding Orthology molecular function
cell projection organization Orthology biological process
cytoplasmic vesicle Orthology cellular component
cell projection Orthology cellular component
neuronal cell body Orthology cellular component
intracellular membrane-bounded organelle Blast cellular component
perinuclear region of cytoplasm Blast cellular component
extracellular exosome Orthology cellular component
cytoplasmic part Orthology cellular component
microtubule organizing center Orthology cellular component
organelle Orthology cellular component
plasma membrane region Orthology cellular component
macromolecular complex Orthology cellular component
membrane organization Orthology biological process
organelle organization Orthology biological process
synapse part Orthology cellular component
endomembrane system Orthology cellular component
neuron part Orthology cellular component
cellular process Orthology biological process
regulation of cellular metabolic process Orthology biological process
postsynapse Orthology cellular component
enzyme binding Orthology molecular function
anion binding Orthology molecular function
guanyl ribonucleotide binding Orthology molecular function
purine ribonucleoside binding Orthology molecular function
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
cytoskeletal protein binding Orthology molecular function
cellular response to organic substance Orthology biological process
protein localization Orthology biological process
cell projection part Orthology cellular component
cellular protein modification process Orthology biological process
chemical synaptic transmission Orthology biological process
regulation of signaling Orthology biological process
protein localization to membrane Orthology biological process
organelle part Orthology cellular component
cell periphery Blast cellular component
peroxisome Blast cellular component
Golgi apparatus part Blast cellular component
adherens junction Blast cellular component
organelle membrane Blast cellular component
cell part Blast cellular component
endoplasmic reticulum part Blast cellular component
cell adhesion molecule binding Blast molecular function
cell adhesion Blast biological process

GO (Orthology)

53 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
G2/M transition of mitotic cell cycle Hs biological process
Golgi membrane Hs cellular component
nucleotide binding Hs molecular function
GTPase activity Hs molecular function
protein binding Hs molecular function
GTP binding Hs molecular function
cytoplasm Hs cellular component
endosome Hs cellular component
Golgi apparatus Hs cellular component
centrosome Hs cellular component
centriole Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
cilium Hs cellular component
vesicle docking involved in exocytosis Hs biological process
autophagy Hs biological process
axonogenesis Hs biological process
synaptic vesicle Hs cellular component
protein secretion Hs biological process
regulation of autophagy Hs biological process
postsynaptic density Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
Rab GTPase binding Hs molecular function
regulation of exocytosis Hs biological process
GDP binding Hs molecular function
protein kinase binding Hs molecular function
cell projection organization Hs biological process
trans-Golgi network transport vesicle Hs cellular component
dendrite Hs cellular component
secretory granule membrane Hs cellular component
phagocytic vesicle membrane Hs cellular component
cytoplasmic vesicle Hs cellular component
myosin V binding Hs molecular function
trans-Golgi network membrane Hs cellular component
cellular response to insulin stimulus Hs biological process
regulation of protein localization Hs biological process
ciliary basal body Hs cellular component
cell projection Hs cellular component
neuronal cell body Hs cellular component
dendritic spine Hs cellular component
post-translational protein modification Hs biological process
phagocytic vesicle Hs cellular component
regulation of long-term neuronal synaptic plasticity Hs biological process
regulation of protein transport Hs biological process
recycling endosome Hs cellular component
recycling endosome membrane Hs cellular component
cilium assembly Hs biological process
extracellular exosome Hs cellular component
protein localization to plasma membrane Hs biological process
ciliary base Hs cellular component
non-motile cilium Hs cellular component

GO (Blast)

58 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
Golgi membrane Hs cellular component 223 9.93e-76
exocyst Hs cellular component 202 5.47e-68
nucleotide binding Hs molecular function 224 1.51e-76
GTPase activity Hs molecular function 224 1.51e-76
receptor binding Hs molecular function 224 1.51e-76
protein binding Hs molecular function 224 1.51e-76
GTP binding Hs molecular function 224 1.51e-76
nucleoplasm Hs cellular component 224 1.51e-76
cytoplasm Hs cellular component 223 9.93e-76
mitochondrion Hs cellular component 224 1.51e-76
endosome Hs cellular component 224 1.51e-76
peroxisomal membrane Hs cellular component 224 1.51e-76
endoplasmic reticulum Hs cellular component 202 5.47e-68
endoplasmic reticulum membrane Hs cellular component 202 5.47e-68
Golgi apparatus Hs cellular component 223 9.93e-76
trans-Golgi network Hs cellular component 202 5.47e-68
centrosome Hs cellular component 223 9.93e-76
centriole Hs cellular component 223 9.93e-76
cytosol Hs cellular component 223 9.93e-76
cytoskeleton Hs cellular component 223 9.93e-76
plasma membrane Hs cellular component 224 1.51e-76
cell-cell adherens junction Hs cellular component 202 5.47e-68
focal adhesion Hs cellular component 202 5.47e-68
cilium Hs cellular component 223 9.93e-76
synaptic vesicle Hs cellular component 224 1.51e-76
endosome membrane Hs cellular component 202 5.47e-68
postsynaptic density Hs cellular component 223 9.93e-76
membrane Hs cellular component 224 1.51e-76
nuclear body Hs cellular component 224 1.51e-76
Rab GTPase binding Hs molecular function 223 9.93e-76
GDP binding Hs molecular function 224 1.51e-76
protein kinase binding Hs molecular function 223 9.93e-76
trans-Golgi network transport vesicle Hs cellular component 223 9.93e-76
dendrite Hs cellular component 223 9.93e-76
cytoplasmic vesicle membrane Hs cellular component 202 5.47e-68
secretory granule membrane Hs cellular component 224 1.51e-76
phagocytic vesicle membrane Hs cellular component 224 1.51e-76
TPR domain binding Hs molecular function 224 1.51e-76
cytoplasmic vesicle Hs cellular component 224 1.51e-76
myosin V binding Hs molecular function 223 9.93e-76
trans-Golgi network membrane Hs cellular component 223 9.93e-76
insulin-responsive compartment Hs cellular component 202 5.47e-68
ciliary basal body Hs cellular component 223 9.93e-76
cell projection Hs cellular component 223 9.93e-76
neuronal cell body Hs cellular component 223 9.93e-76
dendritic spine Hs cellular component 223 9.93e-76
intracellular membrane-bounded organelle Hs cellular component 224 1.51e-76
phagocytic vesicle Hs cellular component 224 1.51e-76
perinuclear region of cytoplasm Hs cellular component 224 1.51e-76
cell tip Hs cellular component 224 1.51e-76
recycling endosome Hs cellular component 223 9.93e-76
recycling endosome membrane Hs cellular component 224 1.51e-76
extracellular exosome Hs cellular component 224 1.51e-76
exocytic vesicle Hs cellular component 202 5.47e-68
endoplasmic reticulum tubular network Hs cellular component 202 5.47e-68
ciliary base Hs cellular component 223 9.93e-76
non-motile cilium Hs cellular component 223 9.93e-76
cadherin binding involved in cell-cell adhesion Hs molecular function 202 5.47e-68

GO (InterProScan)

2 results

GO Term Analysis Type e-value
GTPase activity Pfam molecular function 6.3E-45
GTP binding Pfam molecular function 6.3E-45

Back to Top