Aniseed - Gene card

Gene Card

Best human hits

SEC61G

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007959

Gene Model ID

KH2012:KH.C7.139

Location

KhC7:5599819..5600870

Transcript Models and Sequences

KH2012:KH.C7.139.v1.A.ND1-1
KH2012:KH.C7.139.v1.A.nonSL10-1
KH2012:KH.C7.139.v1.A.nonSL11-1
KH2012:KH.C7.139.v1.A.nonSL13-1
KH2012:KH.C7.139.v1.A.nonSL14-1
KH2012:KH.C7.139.v1.A.nonSL15-1
KH2012:KH.C7.139.v1.A.nonSL16-1
KH2012:KH.C7.139.v1.A.nonSL2-1
KH2012:KH.C7.139.v1.A.nonSL3-1
KH2012:KH.C7.139.v1.A.nonSL4-1
KH2012:KH.C7.139.v1.A.nonSL5-1
KH2012:KH.C7.139.v1.A.nonSL6-1
KH2012:KH.C7.139.v1.A.nonSL7-1
KH2012:KH.C7.139.v1.A.nonSL8-1
KH2012:KH.C7.139.v1.A.nonSL9-1
KH2012:KH.C7.139.v1.A.SL12-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb015k24

Plate: R1CiGC30j14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
Translocase_SecE/Sec61-g	ProSitePatterns	Protein translocase complex, SecE/Sec61-gamma subunit
Translocase_SecE/Sec61-g	Pfam	Protein translocase complex, SecE/Sec61-gamma subunit
Translocase_Sec61-g	TIGRFAM	Protein translocase SEC61 complex, gamma subunit
Prot_translocase_SecE_dom_sf	Gene3D	Protein translocase SecE domain superfamily
Prot_translocase_SecE_dom_sf	SUPERFAMILY	Protein translocase SecE domain superfamily
SecE	Hamap	Preprotein translocase subunit SecE

GOSlim

12 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
intracellular	Orthology	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
cytosol	Orthology	cellular component
protein targeting	Orthology	biological process
intracellular protein transport	Orthology	biological process
protein transport	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
protein targeting to ER	Orthology	biological process
transmembrane transport	Orthology	biological process

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
intracellular	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
cytosol	Hs	cellular component
protein targeting	Hs	biological process
intracellular protein transport	Hs	biological process
protein transporter activity	Hs	molecular function
protein transport	Hs	biological process
P-P-bond-hydrolysis-driven protein transmembrane transporter activity	Hs	molecular function
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
protein targeting to ER	Hs	biological process
protein transmembrane transport	Hs	biological process

GO (Blast)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	126	1.55e-40
intracellular	Hs	cellular component	126	1.55e-40
endoplasmic reticulum	Hs	cellular component	126	1.55e-40
endoplasmic reticulum membrane	Hs	cellular component	126	1.55e-40
cytosol	Hs	cellular component	126	1.55e-40
protein transporter activity	Hs	molecular function	126	1.55e-40
P-P-bond-hydrolysis-driven protein transmembrane transporter activity	Hs	molecular function	126	1.55e-40
membrane	Hs	cellular component	126	1.55e-40
integral component of membrane	Hs	cellular component	126	1.55e-40

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
protein targeting	Pfam	biological process	1.5E-15
intracellular protein transport	Pfam	biological process	1.5E-15
protein transport	TIGRFAM	biological process	3.1E-17
P-P-bond-hydrolysis-driven protein transmembrane transporter activity	TIGRFAM	molecular function	3.1E-17
membrane	TIGRFAM	cellular component	3.1E-17