Aniseed - Gene card

Gene Card

Best human hits

FAM109A; FAM109B; RASGRF1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00007983

Gene Model ID

KH2012:KH.C7.160

Location

KhC7:4931713..4934793

Transcript Models and Sequences

KH2012:KH.C7.160.v1.R.ND2-1
KH2012:KH.C7.160.v2.C.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000022328
NCBI Reference Sequence	XM_002126924.4
NCBI Reference Sequence	XM_018812442.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg031c18

Plate: R1CiGC20j17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
PH-like_dom_sf	Gene3D	PH-like domain superfamily
PH_domain	Pfam	Pleckstrin homology domain
PH_domain	ProSiteProfiles	Pleckstrin homology domain
PH_domain	SMART	Pleckstrin homology domain

GOSlim

17 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
endosome	Orthology	cellular component
early endosome	Orthology	cellular component
Golgi apparatus	Orthology	cellular component
cytosol	Orthology	cellular component
plasma membrane	Blast	cellular component
cytoplasmic vesicle	Orthology	cellular component
protein homodimerization activity	Orthology	molecular function
neuron projection	Blast	cellular component
membrane organization	Orthology	biological process
organelle organization	Orthology	biological process
Golgi apparatus part	Orthology	cellular component
enzyme binding	Blast	molecular function
molecular function regulator	Blast	molecular function
cell projection part	Blast	cellular component
axon	Blast	cellular component
receptor binding	Blast	molecular function

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
receptor recycling	Hs	biological process
protein binding	Hs	molecular function
endosome	Hs	cellular component
early endosome	Hs	cellular component
Golgi apparatus	Hs	cellular component
trans-Golgi network	Hs	cellular component
cytosol	Hs	cellular component
endosome organization	Hs	biological process
clathrin-coated vesicle	Hs	cellular component
cytoplasmic vesicle	Hs	cellular component
retrograde transport, endosome to Golgi	Hs	biological process
protein homodimerization activity	Hs	molecular function
recycling endosome	Hs	cellular component

GO (Blast)