Aniseed - Gene card

Gene Card

Best human hits

HECTD2; HERC4; UBE3A

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008001

Gene Model ID

KH2012:KH.C7.178

Location

KhC7:5585707..5599525

Transcript Models and Sequences

KH2012:KH.C7.178.v1.A.SL1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

citb040g09

Plate: R1CiGC32j10

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
Hect_E3_ubiquitin_ligase	SUPERFAMILY	HECT, E3 ligase catalytic domain
HECT_dom	CDD	HECT domain
HECT_dom	Pfam	HECT domain
HECT_dom	ProSiteProfiles	HECT domain
HECT_dom	SMART	HECT domain

GOSlim

14 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
transcription coactivator activity	Blast	molecular function
ubiquitin-protein transferase activity	Orthology	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
protein ubiquitination	Orthology	biological process
transferase activity	Orthology	molecular function
ligase activity	Blast	molecular function
metal ion binding	Blast	molecular function
intracellular part	Blast	cellular component
macromolecular complex	Blast	cellular component
nucleolus	Blast	cellular component

GO (Orthology)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein polyubiquitination	Hs	biological process
ubiquitin-protein transferase activity	Hs	molecular function
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
protein ubiquitination	Hs	biological process
transferase activity	Hs	molecular function
ubiquitin protein ligase activity	Hs	molecular function

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
proteasome complex	Hs	cellular component	179	2.15e-46
fibrillar center	Hs	cellular component	181	1.36e-46
transcription coactivator activity	Hs	molecular function	179	2.15e-46
ubiquitin-protein transferase activity	Hs	molecular function	434	1.48e-139
protein binding	Hs	molecular function	179	2.15e-46
nucleus	Hs	cellular component	179	2.15e-46
cytoplasm	Hs	cellular component	434	1.48e-139
cytosol	Hs	cellular component	434	1.48e-139
transferase activity	Hs	molecular function	434	1.48e-139
ligase activity	Hs	molecular function	179	2.15e-46
metal ion binding	Hs	molecular function	179	2.15e-46
ubiquitin protein ligase activity	Hs	molecular function	434	1.48e-139

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
ubiquitin-protein transferase activity	CDD	molecular function	2.33581E-109