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GENE CARD

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Gene Card

Best human hits

ANKZF1; ZNF622

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008032

Gene Model ID

KH2012:KH.C7.206

Location

KhC7:551697..556913

Transcript Models and Sequences

  KH2012:KH.C7.206.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000004045
NCBI Reference Sequence XM_009860623.2
NCBI Reference Sequence XM_018812605.1
Collections

Gateway full ORF

2 results

cima813215

Plate: VES58_K13

cima874642

Plate: VES67_M12

Gene collection 1 (N. Satoh)

2 results

cicl022n16

Plate: R1CiGC11k18

cieg028l11

Plate: R1CiGC20m11

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
Znf_C2H2_type ProSitePatterns Zinc finger C2H2-type
Matrin/U1-like-C_Znf_C2H2 SMART Matrin/U1-C-like, C2H2-type zinc finger
Znf_C2H2_sf SUPERFAMILY Zinc finger C2H2 superfamily
Znf_C2H2_type ProSiteProfiles Zinc finger C2H2-type
Znf_C2H2_type SMART Zinc finger C2H2-type
Znf_C2H2_jaz Pfam Zinc finger, double-stranded RNA binding

GOSlim

28 results

GO Term Annotation Origin Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
nucleic acid binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleolus Orthology cellular component
cytoplasm Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
regulation of transcription from RNA polymerase II promoter Orthology biological process
zinc ion binding Orthology molecular function
membrane Blast cellular component
positive regulation of apoptotic process Orthology biological process
metal ion binding Orthology molecular function
intracellular organelle part Orthology cellular component
ribosome Orthology cellular component
macromolecular complex Orthology cellular component
positive regulation of catalytic activity Orthology biological process
kinase activity Orthology molecular function
intracellular signal transduction Orthology biological process
positive regulation of signal transduction Orthology biological process
protein phosphorylation Orthology biological process
cellular response to stress Orthology biological process
peptidase activity, acting on L-amino acid peptides Blast molecular function
membrane part Blast cellular component
whole membrane Blast cellular component
mitochondrial membrane Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

19 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
nucleic acid binding Hs molecular function
RNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleolus Hs cellular component
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
regulation of transcription from RNA polymerase II promoter Hs biological process
zinc ion binding Hs molecular function
cytosolic large ribosomal subunit Hs cellular component
preribosome, large subunit precursor Hs cellular component
positive regulation of kinase activity Hs biological process
ribosomal large subunit biogenesis Hs biological process
positive regulation of apoptotic process Hs biological process
positive regulation of MAPK cascade Hs biological process
positive regulation of JNK cascade Hs biological process
metal ion binding Hs molecular function

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 372 9.47e-125
nucleic acid binding Hs molecular function 372 9.47e-125
RNA binding Hs molecular function 372 9.47e-125
thiol-dependent ubiquitin-specific protease activity Hs molecular function 43.9 1.96e-04
protein binding Hs molecular function 372 9.47e-125
nucleus Hs cellular component 372 9.47e-125
nucleolus Hs cellular component 372 9.47e-125
cytoplasm Hs cellular component 372 9.47e-125
Golgi apparatus Hs cellular component 372 9.47e-125
cytosol Hs cellular component 372 9.47e-125
zinc ion binding Hs molecular function 372 9.47e-125
membrane Hs cellular component 43.9 1.96e-04
cytosolic large ribosomal subunit Hs cellular component 372 9.47e-125
preribosome, large subunit precursor Hs cellular component 372 9.47e-125
Cdc48p-Npl4p-Vms1p AAA ATPase complex Hs cellular component 43.9 1.96e-04
metal ion binding Hs molecular function 372 9.47e-125

GO (InterProScan)

2 results

GO Term Analysis Type e-value
nucleic acid binding SMART molecular function 3.7E-4
zinc ion binding SMART molecular function 3.7E-4

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