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Gene Card

Best human hits

DLX1; DLX2; DLX5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008072

Gene Model ID

KH2012:KH.C7.243

Location

KhC7:627842..630721

Transcript Models and Sequences

  KH2012:KH.C7.243.v1.A.ND1-1
KH2012:KH.C7.243.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000004374
NCBI Reference Sequence NM_001032500.1
Collections

Gateway full ORF

2 results

cien199916

Plate: VES101_F08

cien212882

Plate: VES103_D08

Gene collection 1 (N. Satoh)

2 results

cicl022f04

Plate: R1CiGC11g14

cicl052n11

Plate: R1CiGC14k19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

16 results

Gene Phylogeny

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Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
Homeobox_CS ProSitePatterns Homeobox, conserved site
Homeobox_dom SMART Homeobox domain
Homeobox_dom CDD Homeobox domain
HTH_motif PRINTS Helix-turn-helix motif
Homeobox_dom ProSiteProfiles Homeobox domain
Homeobox_dom Pfam Homeobox domain
Homeobox-like_sf SUPERFAMILY Homeobox-like domain superfamily

GOSlim

16 results

GO Term Annotation Origin Type
RNA polymerase II regulatory region sequence-specific DNA binding Blast molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding Blast molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding Blast molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Blast molecular function
DNA binding Blast molecular function
chromatin binding Blast molecular function
transcription factor activity, sequence-specific DNA binding Blast molecular function
protein binding Blast molecular function
nucleus Blast cellular component
cytoplasm Blast cellular component
regulation of transcription, DNA-templated InterProScan biological process
sequence-specific DNA binding Blast molecular function
transcription regulatory region DNA binding Blast molecular function
intracellular non-membrane-bounded organelle Blast cellular component
nuclear lumen Blast cellular component
RNA binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
nuclear chromatin Hs cellular component 109 1.13e-26
RNA polymerase II regulatory region sequence-specific DNA binding Hs molecular function 111 5.41e-27
RNA polymerase II core promoter proximal region sequence-specific DNA binding Hs molecular function 109 1.13e-26
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 111 5.41e-27
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding Hs molecular function 109 1.13e-26
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding Hs molecular function 111 5.41e-27
DNA binding Hs molecular function 111 5.41e-27
chromatin binding Hs molecular function 111 5.41e-27
transcription factor activity, sequence-specific DNA binding Hs molecular function 111 5.41e-27
single-stranded RNA binding Hs molecular function 111 5.41e-27
protein binding Hs molecular function 111 5.41e-27
nucleus Hs cellular component 111 5.41e-27
cytoplasm Hs cellular component 109 1.13e-26
sequence-specific DNA binding Hs molecular function 111 5.41e-27
transcription regulatory region DNA binding Hs molecular function 109 1.13e-26
HMG box domain binding Hs molecular function 109 1.13e-26

GO (InterProScan)

3 results

GO Term Analysis Type e-value
DNA binding SMART molecular function 4.6E-24
regulation of transcription, DNA-templated ProSitePatterns biological process
sequence-specific DNA binding ProSitePatterns molecular function

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