Aniseed - Gene card

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000012018
ENSEMBL	ENSCING00000019694
ENSEMBL	ENSCING00000021582
NCBI Reference Sequence	NM_001078483.1
NCBI Reference Sequence	XM_018812347.1

Collections

Gene collection 1 (N. Satoh)

1 result

cilv040n16

Plate: R1CiGC28i16

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Znf_C2H2_sf	SUPERFAMILY	Zinc finger C2H2 superfamily
Znf_C2H2_type	ProSiteProfiles	Zinc finger C2H2-type
Znf_C2H2_type	ProSitePatterns	Zinc finger C2H2-type
Znf_C2H2_type	SMART	Zinc finger C2H2-type

GOSlim

31 results

GO Term	Annotation Origin	Type
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
nucleic acid binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
protein binding	Blast	molecular function
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
microtubule binding	Blast	molecular function
transcription factor binding	Blast	molecular function
zinc ion binding	Blast	molecular function
membrane	Blast	cellular component
nuclear speck	Blast	cellular component
cell projection	Blast	cellular component
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
metal ion binding	Blast	molecular function
organelle	Blast	cellular component
plasma membrane region	Blast	cellular component
macromolecular complex	Blast	cellular component
cell projection part	Blast	cellular component
microtubule	Blast	cellular component
cytoplasmic part	Blast	cellular component
nucleoplasm part	Blast	cellular component
enzyme binding	Blast	molecular function
organelle part	Blast	cellular component

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

35 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II regulatory region sequence-specific DNA binding	Hs	molecular function	379	2.54e-108
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	411	3.28e-119
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	411	3.28e-119
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	411	3.28e-119
nucleic acid binding	Hs	molecular function	411	3.28e-119
DNA binding	Hs	molecular function	411	3.28e-119
chromatin binding	Hs	molecular function	411	3.28e-119
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	411	3.28e-119
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	333	3.54e-95
protein binding	Hs	molecular function	411	3.28e-119
nucleus	Hs	cellular component	411	3.28e-119
nucleoplasm	Hs	cellular component	411	3.28e-119
nucleolus	Hs	cellular component	411	3.28e-119
cytoplasm	Hs	cellular component	411	3.28e-119
cytosol	Hs	cellular component	411	3.28e-119
cilium	Hs	cellular component	411	3.28e-119
axoneme	Hs	cellular component	411	3.28e-119
beta-catenin binding	Hs	molecular function	379	2.54e-108
microtubule binding	Hs	molecular function	333	3.54e-95
transcription factor binding	Hs	molecular function	411	3.28e-119
zinc ion binding	Hs	molecular function	411	3.28e-119
membrane	Hs	cellular component	411	3.28e-119
mediator complex	Hs	cellular component	379	2.54e-108
nuclear speck	Hs	cellular component	411	3.28e-119
transcriptional repressor complex	Hs	cellular component	379	2.54e-108
motile cilium	Hs	cellular component	411	3.28e-119
histone acetyltransferase binding	Hs	molecular function	379	2.54e-108
histone deacetylase binding	Hs	molecular function	379	2.54e-108
cell projection	Hs	cellular component	411	3.28e-119
sequence-specific DNA binding	Hs	molecular function	411	3.28e-119
transcription regulatory region DNA binding	Hs	molecular function	411	3.28e-119
metal ion binding	Hs	molecular function	411	3.28e-119
ciliary tip	Hs	cellular component	411	3.28e-119
ciliary base	Hs	cellular component	411	3.28e-119
promoter-specific chromatin binding	Hs	molecular function	411	3.28e-119

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
nucleic acid binding	SMART	molecular function	7.1E-4

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences