Aniseed - Gene card

Gene Card

Best human hits

GHITM; TMBIM6

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008246

Gene Model ID

KH2012:KH.C7.402

Location

KhC7:2203863..2205336

Transcript Models and Sequences

KH2012:KH.C7.402.v1.A.nonSL2-1
KH2012:KH.C7.402.v1.A.nonSL3-1
KH2012:KH.C7.402.v1.A.SL1-1
KH2012:KH.C7.402.v1.A.SL4-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000022580
NCBI Reference Sequence	XM_002128771.4
NCBI Reference Sequence	XM_018812417.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl056p17

Plate: R1CiGC14d22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Bax_inhibitor_1-related	Pfam	Bax inhibitor 1-related
Bax_inhibitor_1-related	PANTHER	Bax inhibitor 1-related
GHITM	CDD	Growth hormone-inducible transmembrane protein

GOSlim

16 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
integral component of plasma membrane	Blast	cellular component
apoptotic process	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
enzyme binding	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
mitochondrial membrane	Blast	cellular component
extracellular exosome	Orthology	cellular component
enzyme regulator activity	Blast	molecular function

GO (Orthology)

7 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein binding	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
apoptotic process	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
extracellular exosome	Hs	cellular component

GO (Blast)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	311	7.40e-105
nucleus	Hs	cellular component	40.4	8.62e-04
cytoplasm	Hs	cellular component	40.4	8.62e-04
mitochondrion	Hs	cellular component	311	7.40e-105
mitochondrial inner membrane	Hs	cellular component	311	7.40e-105
endoplasmic reticulum	Hs	cellular component	40.4	8.62e-04
endoplasmic reticulum membrane	Hs	cellular component	40.4	8.62e-04
integral component of plasma membrane	Hs	cellular component	40.4	8.62e-04
membrane	Hs	cellular component	311	7.40e-105
integral component of membrane	Hs	cellular component	311	7.40e-105
enzyme binding	Hs	molecular function	40.4	8.62e-04
ubiquitin protein ligase binding	Hs	molecular function	40.4	8.62e-04
mitochondrial membrane	Hs	cellular component	40.4	8.62e-04
endoribonuclease inhibitor activity	Hs	molecular function	40.4	8.62e-04
extracellular exosome	Hs	cellular component	311	7.40e-105

GO (InterProScan)