Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000002157
NCBI Reference Sequence	NM_001032479.1

Collections

Gene collection 1 (N. Satoh)

1 result

cilv039j03

Plate: R1CiGC28a10

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

1 results

Cirobu.REG.KhC7:1784136-1786244|En REG00001520 [ regulatory_region (complex_region) ]

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox-engrailed_C-terminal	Pfam	Homeobox engrailed, C-terminal
Homeobox_engrailed	PRINTS	Homeobox domain engrailed
Homeobox_dom	CDD	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Homeobox_dom	SMART	Homeobox domain
Homeobox_dom	Pfam	Homeobox domain

GOSlim

22 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
nucleus	Orthology	cellular component
nucleolus	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
multicellular organism development	Orthology	biological process
brain development	Orthology	biological process
anatomical structure morphogenesis	Orthology	biological process
membrane	Blast	cellular component
sequence-specific DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
protein binding	Orthology	molecular function
protein C-terminus binding	Orthology	molecular function
negative regulation of transcription, DNA-templated	Orthology	biological process
protein N-terminus binding	Orthology	molecular function
anatomical structure formation involved in morphogenesis	Orthology	biological process
animal organ development	Orthology	biological process
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
multicellular organism development	Hs	biological process
brain development	Hs	biological process
sequence-specific DNA binding	Hs	molecular function
chromatin binding	Hs	molecular function
protein binding	Hs	molecular function
protein C-terminus binding	Hs	molecular function
pituitary gland development	Hs	biological process
otic vesicle formation	Hs	biological process
nose development	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
protein N-terminus binding	Hs	molecular function
forebrain morphogenesis	Hs	biological process

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	149	1.14e-41
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	149	1.14e-41
transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	149	1.14e-41
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function	66.2	3.96e-12
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	66.2	3.96e-12
fibrillar center	Hs	cellular component	147	2.15e-41
DNA binding	Hs	molecular function	149	1.14e-41
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	66.2	3.96e-12
nucleus	Hs	cellular component	149	1.14e-41
nucleolus	Hs	cellular component	147	2.15e-41
membrane	Hs	cellular component	147	2.15e-41
chromatin DNA binding	Hs	molecular function	66.2	3.96e-12
sequence-specific DNA binding	Hs	molecular function	149	1.14e-41

GO (InterProScan)

5 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	3.0E-24
nucleus	PRINTS	cellular component	4.6E-10
regulation of transcription, DNA-templated	ProSitePatterns	biological process
multicellular organism development	PRINTS	biological process	4.6E-10
sequence-specific DNA binding	ProSitePatterns	molecular function

Gene Card

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Transcript Models and Sequences