Aniseed - Gene card

Gene Card

Best human hits

AL355315.1; HOGA1; NPL

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008288

Gene Model ID

KH2012:KH.C7.441

Location

KhC7:5547445..5551185

Transcript Models and Sequences

KH2012:KH.C7.441.v1.A.ND1-1
KH2012:KH.C7.441.v2.A.SL2-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000023328

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cicl027j04

Plate: R1CiGC11h14

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
DapA-like	PANTHER	DapA-like
DapA-like	PRINTS	DapA-like
DapA-like	SMART	DapA-like
Aldolase_TIM	Gene3D	Aldolase-type TIM barrel
DapA-like	Pfam	DapA-like
DapA-like	PIRSF	DapA-like

GOSlim

21 results

GO Term	Annotation Origin	Type
catalytic activity	Orthology	molecular function
protein binding	Blast	molecular function
cytoplasm	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component
lysosomal membrane	Blast	cellular component
endosome	Blast	cellular component
cytosol	Blast	cellular component
plasma membrane	Blast	cellular component
metabolic process	Orthology	biological process
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
identical protein binding	Blast	molecular function
protein homodimerization activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
cellular biosynthetic process	Orthology	biological process
cellular metabolic process	Orthology	biological process
organic substance metabolic process	Orthology	biological process
phosphotransferase activity, alcohol group as acceptor	Blast	molecular function
kinase activity	Blast	molecular function
Golgi apparatus part	Blast	cellular component

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
catalytic activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial matrix	Hs	cellular component
metabolic process	Hs	biological process
4-hydroxy-2-oxoglutarate aldolase activity	Hs	molecular function
glyoxylate catabolic process	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
lyase activity	Hs	molecular function
protein homodimerization activity	Hs	molecular function
pyruvate biosynthetic process	Hs	biological process
glyoxylate metabolic process	Hs	biological process
extracellular exosome	Hs	cellular component

GO (Blast)

19 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
catalytic activity	Hs	molecular function	367	1.57e-127
1-phosphatidylinositol 4-kinase activity	Hs	molecular function	67.0	2.90e-12
protein binding	Hs	molecular function	79.0	1.35e-16
cytoplasm	Hs	cellular component	79.0	1.35e-16
mitochondrion	Hs	cellular component	367	1.57e-127
mitochondrial matrix	Hs	cellular component	367	1.57e-127
lysosomal membrane	Hs	cellular component	67.0	2.90e-12
endosome	Hs	cellular component	67.0	2.90e-12
trans-Golgi network	Hs	cellular component	67.0	2.90e-12
cytosol	Hs	cellular component	79.0	1.35e-16
plasma membrane	Hs	cellular component	67.0	2.90e-12
4-hydroxy-2-oxoglutarate aldolase activity	Hs	molecular function	367	1.57e-127
N-acetylneuraminate lyase activity	Hs	molecular function	79.0	1.35e-16
membrane	Hs	cellular component	367	1.57e-127
integral component of membrane	Hs	cellular component	367	1.57e-127
lyase activity	Hs	molecular function	367	1.57e-127
identical protein binding	Hs	molecular function	79.0	1.35e-16
protein homodimerization activity	Hs	molecular function	367	1.57e-127
extracellular exosome	Hs	cellular component	367	1.57e-127

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
catalytic activity	Gene3D	molecular function	3.9E-106
metabolic process	PANTHER	biological process	1.2E-97
lyase activity	PANTHER	molecular function	1.2E-97