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  4. Gene 'Boleac.CG.SB_v3.S198...' > 

Gene Card

Best human hits

TSC22D1; TSC22D3; TSC22D4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008353

Gene Model ID

KH2012:KH.C7.50

Location

KhC7:3769502..3777822

Transcript Models and Sequences

  KH2012:KH.C7.50.v1.A.SL1-1
KH2012:KH.C7.50.v1.A.SL2-1

External Database Gene Card

External database links

3 results

Database Gene ID
ENSEMBL ENSCING00000007168
NCBI Reference Sequence NM_001078375.1
NCBI Reference Sequence XM_018812343.1
Collections

Gateway full ORF

2 results

cima87437

Plate: VES57_F10

cima819313

Plate: VES59_K16

Gene collection 1 (N. Satoh)

1 result

cicl054n02

Plate: R1CiGC14b07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
TSC-22_Dip_Bun PANTHER TSC-22 / Dip / Bun
TSC-22_Dip_Bun Pfam TSC-22 / Dip / Bun

GOSlim

18 results

GO Term Annotation Origin Type
negative regulation of transcription from RNA polymerase II promoter Orthology biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding Orthology molecular function
transcription factor activity, sequence-specific DNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
cytoplasm Orthology cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
regulation of transcription from RNA polymerase II promoter Orthology biological process
negative regulation of transcription, DNA-templated Orthology biological process
protein dimerization activity Blast molecular function
response to stress Orthology biological process
ion transport Orthology biological process
transmembrane transport Orthology biological process
transcription factor binding Orthology molecular function
immune system process Orthology biological process
negative regulation of apoptotic process Orthology biological process

GO (Orthology)

15 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
negative regulation of transcription from RNA polymerase II promoter Hs biological process
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function
transcription factor activity, sequence-specific DNA binding Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
regulation of transcription from RNA polymerase II promoter Hs biological process
response to osmotic stress Hs biological process
ion transmembrane transport Hs biological process
MRF binding Hs molecular function
negative regulation of transcription, DNA-templated Hs biological process
negative regulation of activation-induced cell death of T cells Hs biological process

GO (Blast)

8 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
RNA polymerase II transcription factor activity, sequence-specific DNA binding Hs molecular function 79.0 5.66e-15
transcription factor activity, sequence-specific DNA binding Hs molecular function 79.0 5.66e-15
protein binding Hs molecular function 79.0 5.66e-15
nucleus Hs cellular component 79.0 5.66e-15
cytoplasm Hs cellular component 79.0 5.66e-15
cytosol Hs cellular component 70.1 1.45e-13
MRF binding Hs molecular function 70.1 1.45e-13
protein dimerization activity Hs molecular function 79.0 5.66e-15

GO (InterProScan)

2 results

GO Term Analysis Type e-value
transcription factor activity, sequence-specific DNA binding PANTHER molecular function 1.1E-100
regulation of transcription, DNA-templated PANTHER biological process 1.1E-100

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