Aniseed - Gene card

Gene Card

Best human hits

OLFM2; OLFML2A; OLFML2B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008354

Gene Model ID

KH2012:KH.C7.500

Location

KhC7:41314..49186

Transcript Models and Sequences

KH2012:KH.C7.500.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000003805

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb041h22

Plate: R1CiGC33a19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

10 results

Cirobu.REG.KH2012.C7:40900-41044|Noe2; Olm2A/B REG00001253 [ regulatory_region (enhancer) ]
- Cirobu.REG.KH2012.C7:40900-40993|Noe2; Olm2A/B REG00001254 [ regulatory_region (enhancer) ]

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Olfac-like_dom	Pfam	Olfactomedin-like domain
OLFML2A	PANTHER	Olfactomedin-like protein 2A
Olfac-like_dom	SMART	Olfactomedin-like domain
Olfac-like_dom	ProSiteProfiles	Olfactomedin-like domain

GOSlim

15 results

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
extracellular region	Orthology	cellular component
extracellular space	Orthology	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
membrane	Blast	cellular component
cell junction	Blast	cellular component
extracellular matrix organization	Orthology	biological process
protein homodimerization activity	Orthology	molecular function
synapse	Blast	cellular component
synaptic membrane	Blast	cellular component
binding	Orthology	molecular function
integral component of plasma membrane	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
extracellular region	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
extracellular space	Hs	cellular component
extracellular matrix organization	Hs	biological process
protein homodimerization activity	Hs	molecular function
extracellular matrix binding	Hs	molecular function

GO (Blast)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein binding	Hs	molecular function	186	2.19e-52
extracellular region	Hs	cellular component	370	9.31e-120
proteinaceous extracellular matrix	Hs	cellular component	370	9.31e-120
extracellular space	Hs	cellular component	289	8.42e-88
nucleus	Hs	cellular component	186	2.19e-52
nucleoplasm	Hs	cellular component	186	2.19e-52
cytoplasm	Hs	cellular component	186	2.19e-52
membrane	Hs	cellular component	186	2.19e-52
cell junction	Hs	cellular component	186	2.19e-52
AMPA glutamate receptor complex	Hs	cellular component	186	2.19e-52
protein homodimerization activity	Hs	molecular function	370	9.31e-120
synapse	Hs	cellular component	186	2.19e-52
extracellular matrix binding	Hs	molecular function	370	9.31e-120
synaptic membrane	Hs	cellular component	186	2.19e-52

GO (InterProScan)

No result

GO Term	Analysis	Type	e-value