Aniseed - Gene card

Gene Card

Best human hits

COX6C

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008513

Gene Model ID

KH2012:KH.C7.646

Location

KhC7:4690253..4691682

Transcript Models and Sequences

KH2012:KH.C7.646.v1.A.SL1-1
KH2012:KH.C7.646.v1.A.SL2-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000011872
NCBI Reference Sequence	XM_009860725.2

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cieg022g14

Plate: R1CiGC18p22

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
COX6C	ProDom	Cytochrome c oxidase subunit 6C
Cytochrome_c_oxidase_VIc_sf	SUPERFAMILY	Mitochondrial cytochrome c oxidase subunit VIc/VIIs superfamily
Cytochrome_c_oxidase_VIc/VIIs	Pfam	Mitochondrial cytochrome c oxidase subunit VIc/VIIs
Cytochrome_c_oxidase_VIc_sf	Gene3D	Mitochondrial cytochrome c oxidase subunit VIc/VIIs superfamily

GOSlim

10 results

GO Term	Annotation Origin	Type
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
membrane	Orthology	cellular component
integral component of membrane	Orthology	cellular component
transmembrane transport	Orthology	biological process
catalytic activity	Orthology	molecular function
cellular metabolic process	Orthology	biological process
oxidation-reduction process	Orthology	biological process
monovalent inorganic cation transport	Orthology	biological process
phosphorylation	Orthology	biological process

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cytochrome-c oxidase activity	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
generation of precursor metabolites and energy	Hs	biological process
mitochondrial electron transport, cytochrome c to oxygen	Hs	biological process
membrane	Hs	cellular component
integral component of membrane	Hs	cellular component
electron transport chain	Hs	biological process
hydrogen ion transmembrane transport	Hs	biological process

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
cytochrome-c oxidase activity	Hs	molecular function	34.3	0.002
mitochondrion	Hs	cellular component	34.3	0.002
mitochondrial inner membrane	Hs	cellular component	34.3	0.002
membrane	Hs	cellular component	34.3	0.002
integral component of membrane	Hs	cellular component	34.3	0.002

GO (InterProScan)