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Gene Card

Best human hits

EYA1; EYA2; EYA4

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008576

Gene Model ID

KH2012:KH.C7.703

Location

KhC7:6049592..6058225

Transcript Models and Sequences

  KH2012:KH.C7.703.v1.B.SL2-1
KH2012:KH.C7.703.v2.A.ND1-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000008588
NCBI Reference Sequence XM_004226188.3
Collections

Gateway full ORF

2 results

cien149438

Plate: VES93_N15

cien177364

Plate: VES97_P15

Gene collection 1 (N. Satoh)

2 results

cilv029d14

Plate: R1CiGC27d09

cign058m23

Plate: R1CiGC42b06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

1 results

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term Analysis Definition
EYA_dom_sf Gene3D EYA domain superfamily
EYA4 PANTHER Eyes absent homologue 4
EYA_fam PANTHER Eyes absent family
EYA_dom TIGRFAM EYA domain
EYA_dom CDD EYA domain

GOSlim

43 results

GO Term Annotation Origin Type
magnesium ion binding Orthology molecular function
RNA binding Orthology molecular function
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
cytosol Orthology cellular component
DNA repair Orthology biological process
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
protein dephosphorylation Orthology biological process
cellular response to DNA damage stimulus Orthology biological process
multicellular organism development Orthology biological process
visual perception Orthology biological process
sensory perception of sound Orthology biological process
transcription factor binding Orthology molecular function
anatomical structure morphogenesis Orthology biological process
nuclear body Orthology cellular component
hydrolase activity Orthology molecular function
cell differentiation Orthology biological process
macromolecular complex Orthology cellular component
positive regulation of transcription, DNA-templated Orthology biological process
positive regulation of transcription from RNA polymerase II promoter Orthology biological process
metal ion binding Orthology molecular function
anatomical structure development Orthology biological process
centrosome Orthology cellular component
animal organ development Orthology biological process
heart development Orthology biological process
organelle organization Orthology biological process
anatomical structure formation involved in morphogenesis Orthology biological process
protein modification by small protein conjugation Orthology biological process
cell development Orthology biological process
neuron differentiation Orthology biological process
positive regulation of cell proliferation Orthology biological process
system development Orthology biological process
cell surface receptor signaling pathway Orthology biological process
apoptotic process Orthology biological process
signal transduction Orthology biological process
membrane organization Orthology biological process
negative regulation of signal transduction Orthology biological process
negative regulation of apoptotic process Orthology biological process
intracellular part Orthology cellular component

GO (Orthology)

60 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
magnesium ion binding Hs molecular function
ureteric bud development Hs biological process
branching involved in ureteric bud morphogenesis Hs biological process
outflow tract morphogenesis Hs biological process
RNA binding Hs molecular function
phosphoprotein phosphatase activity Hs molecular function
protein tyrosine phosphatase activity Hs molecular function
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
cytosol Hs cellular component
DNA repair Hs biological process
double-strand break repair Hs biological process
chromatin organization Hs biological process
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process
protein dephosphorylation Hs biological process
cellular response to DNA damage stimulus Hs biological process
multicellular organism development Hs biological process
pattern specification process Hs biological process
mesodermal cell fate specification Hs biological process
visual perception Hs biological process
sensory perception of sound Hs biological process
transcription factor binding Hs molecular function
anatomical structure morphogenesis Hs biological process
animal organ morphogenesis Hs biological process
response to ionizing radiation Hs biological process
striated muscle tissue development Hs biological process
histone dephosphorylation Hs biological process
nuclear body Hs cellular component
hydrolase activity Hs molecular function
protein sumoylation Hs biological process
cell differentiation Hs biological process
macromolecular complex Hs cellular component
protein-DNA complex Hs cellular component
peptidyl-tyrosine dephosphorylation Hs biological process
ear morphogenesis Hs biological process
inner ear morphogenesis Hs biological process
cell fate commitment Hs biological process
regulation of neuron differentiation Hs biological process
positive regulation of DNA repair Hs biological process
positive regulation of transcription, DNA-templated Hs biological process
positive regulation of transcription from RNA polymerase II promoter Hs biological process
metal ion binding Hs molecular function
neuron fate specification Hs biological process
semicircular canal morphogenesis Hs biological process
inner ear development Hs biological process
anatomical structure development Hs biological process
positive regulation of epithelial cell proliferation Hs biological process
pharyngeal system development Hs biological process
otic vesicle development Hs biological process
otic vesicle morphogenesis Hs biological process
positive regulation of secondary heart field cardioblast proliferation Hs biological process
extrinsic apoptotic signaling pathway in absence of ligand Hs biological process
mitochondrial outer membrane permeabilization Hs biological process
negative regulation of extrinsic apoptotic signaling pathway in absence of ligand Hs biological process
transcription factor complex Hs cellular component
centrosome Hs cellular component

GO (Blast)

16 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
magnesium ion binding Hs molecular function 445 2.39e-152
RNA binding Hs molecular function 499 4.26e-173
phosphoprotein phosphatase activity Hs molecular function 499 4.26e-173
protein tyrosine phosphatase activity Hs molecular function 499 4.26e-173
protein binding Hs molecular function 499 4.26e-173
nucleus Hs cellular component 499 4.26e-173
nucleoplasm Hs cellular component 499 4.26e-173
cytoplasm Hs cellular component 499 4.26e-173
mitochondrion Hs cellular component 445 2.39e-152
cytosol Hs cellular component 445 2.39e-152
transcription factor binding Hs molecular function 491 8.21e-169
nuclear body Hs cellular component 499 4.26e-173
hydrolase activity Hs molecular function 499 4.26e-173
macromolecular complex Hs cellular component 499 4.26e-173
protein-DNA complex Hs cellular component 499 4.26e-173
metal ion binding Hs molecular function 499 4.26e-173

GO (InterProScan)

3 results

GO Term Analysis Type e-value
protein tyrosine phosphatase activity PANTHER molecular function 6.0E-217
multicellular organism development CDD biological process 2.97557E-159
sensory perception of sound PANTHER biological process 6.0E-217

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