Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

EHHADH; HADH; HADHA

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008606

Gene Model ID

KH2012:KH.C7.730

Location

KhC7:98041..99207

Transcript Models and Sequences

  KH2012:KH.C7.730.v1.A.nonSL10-1
KH2012:KH.C7.730.v1.A.nonSL11-1
KH2012:KH.C7.730.v1.A.nonSL12-1
KH2012:KH.C7.730.v1.A.nonSL13-1
KH2012:KH.C7.730.v1.A.nonSL15-1
KH2012:KH.C7.730.v1.A.nonSL2-1
KH2012:KH.C7.730.v1.A.nonSL3-1
KH2012:KH.C7.730.v1.A.nonSL4-1
KH2012:KH.C7.730.v1.A.nonSL5-1
KH2012:KH.C7.730.v1.A.nonSL6-1
KH2012:KH.C7.730.v1.A.nonSL7-1
KH2012:KH.C7.730.v1.A.nonSL8-1
KH2012:KH.C7.730.v1.A.nonSL9-1
KH2012:KH.C7.730.v1.A.SL1-1
KH2012:KH.C7.730.v1.A.SL14-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000003744
NCBI Reference Sequence XM_002126906.4
Collections

Gateway full ORF

2 results

cima875521

Plate: VES67_A17

cien185216

Plate: VES98_E22

Gene collection 1 (N. Satoh)

1 result

cicl019g11

Plate: R1CiGC10j06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree
 Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term Analysis Definition
3-OHacyl-CoA_DH_CS ProSitePatterns 3-hydroxyacyl-CoA dehydrogenase, conserved site
3-OHacyl-CoA_DH_NAD-bd Pfam 3-hydroxyacyl-CoA dehydrogenase, NAD binding
NAD(P)-bd_dom_sf SUPERFAMILY NAD(P)-binding domain superfamily
6PGD_dom2 Gene3D 6-phosphogluconate dehydrogenase, domain 2
3HC_DH_C Pfam 3-hydroxyacyl-CoA dehydrogenase, C-terminal
6-PGluconate_DH-like_C_sf SUPERFAMILY 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily
3-OHacyl-CoA_DH PIRSF 3-hydroxyacyl-CoA dehydrogenase

GOSlim

27 results

GO Term Annotation Origin Type
catalytic activity Orthology molecular function
receptor binding Blast molecular function
protein binding Blast molecular function
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
mitochondrion Orthology cellular component
mitochondrial inner membrane Orthology cellular component
mitochondrial matrix Orthology cellular component
peroxisome Blast cellular component
cytosol Blast cellular component
enzyme binding Blast molecular function
oxidation-reduction process Orthology biological process
organic substance metabolic process Orthology biological process
cellular metabolic process Orthology biological process
response to organic substance Orthology biological process
response to stimulus Orthology biological process
protein transport Orthology biological process
cell-cell signaling Orthology biological process
anion binding Orthology molecular function
nucleotide binding Orthology molecular function
coenzyme binding Orthology molecular function
adenyl ribonucleotide binding Blast molecular function
transferase activity Blast molecular function
intracellular organelle part Blast cellular component
intracellular organelle lumen Blast cellular component
macromolecular complex Blast cellular component
intracellular non-membrane-bounded organelle Blast cellular component

GO (Orthology)

17 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
3-hydroxyacyl-CoA dehydrogenase activity Hs molecular function
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
mitochondrion Hs cellular component
mitochondrial inner membrane Hs cellular component
mitochondrial matrix Hs cellular component
lipid metabolic process Hs biological process
fatty acid metabolic process Hs biological process
fatty acid beta-oxidation Hs biological process
response to hormone Hs biological process
response to activity Hs biological process
oxidoreductase activity Hs molecular function
response to insulin Hs biological process
response to drug Hs biological process
negative regulation of insulin secretion Hs biological process
oxidation-reduction process Hs biological process
NAD+ binding Hs molecular function

GO (Blast)

27 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
fatty-acyl-CoA binding Hs molecular function 162 3.98e-45
catalytic activity Hs molecular function 162 3.98e-45
3-hydroxyacyl-CoA dehydrogenase activity Hs molecular function 388 3.13e-135
acetyl-CoA C-acetyltransferase activity Hs molecular function 162 3.98e-45
acetyl-CoA C-acyltransferase activity Hs molecular function 162 3.98e-45
dodecenoyl-CoA delta-isomerase activity Hs molecular function 135 2.52e-35
enoyl-CoA hydratase activity Hs molecular function 162 3.98e-45
receptor binding Hs molecular function 135 2.52e-35
protein binding Hs molecular function 162 3.98e-45
nucleoplasm Hs cellular component 388 3.13e-135
cytoplasm Hs cellular component 388 3.13e-135
mitochondrion Hs cellular component 388 3.13e-135
mitochondrial inner membrane Hs cellular component 388 3.13e-135
mitochondrial matrix Hs cellular component 388 3.13e-135
peroxisome Hs cellular component 135 2.52e-35
peroxisomal matrix Hs cellular component 135 2.52e-35
cytosol Hs cellular component 135 2.52e-35
oxidoreductase activity Hs molecular function 388 3.13e-135
mitochondrial fatty acid beta-oxidation multienzyme complex Hs cellular component 162 3.98e-45
long-chain-enoyl-CoA hydratase activity Hs molecular function 162 3.98e-45
long-chain-3-hydroxyacyl-CoA dehydrogenase activity Hs molecular function 162 3.98e-45
lyase activity Hs molecular function 162 3.98e-45
isomerase activity Hs molecular function 135 2.52e-35
enzyme binding Hs molecular function 135 2.52e-35
mitochondrial nucleoid Hs cellular component 162 3.98e-45
NAD binding Hs molecular function 162 3.98e-45
NAD+ binding Hs molecular function 388 3.13e-135

GO (InterProScan)

5 results

GO Term Analysis Type e-value
3-hydroxyacyl-CoA dehydrogenase activity Pfam molecular function 5.4E-34
fatty acid metabolic process Pfam biological process 5.4E-34
oxidoreductase activity Gene3D molecular function 1.9E-37
oxidation-reduction process Gene3D biological process 1.9E-37
NAD+ binding PIRSF molecular function 1.4E-97

Back to Top