Aniseed - Gene card

Gene Card

Best human hits

AC105001.2; CMTR1; PINX1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008653

Gene Model ID

KH2012:KH.C7.774

Location

KhC7:3739275..3742751

Transcript Models and Sequences

KH2012:KH.C7.774.v1.A.ND1-1
KH2012:KH.C7.774.v1.A.SL6-1
KH2012:KH.C7.774.v2.A.nonSL10-1
KH2012:KH.C7.774.v2.A.nonSL11-1
KH2012:KH.C7.774.v2.A.nonSL12-1
KH2012:KH.C7.774.v2.A.nonSL13-1
KH2012:KH.C7.774.v2.A.nonSL3-1
KH2012:KH.C7.774.v2.A.nonSL4-1
KH2012:KH.C7.774.v2.A.nonSL5-1
KH2012:KH.C7.774.v2.A.nonSL7-1
KH2012:KH.C7.774.v2.A.nonSL8-1
KH2012:KH.C7.774.v2.A.nonSL9-1
KH2012:KH.C7.774.v2.R.ND2-1
KH2012:KH.C7.774.v3.A.SL6-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000019756
NCBI Reference Sequence	XM_002129729.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad063p04

Plate: R1CiGC06b05

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
G_patch_dom	Pfam	G-patch domain
G_patch_dom	ProSiteProfiles	G-patch domain
G_patch_dom	SMART	G-patch domain

GOSlim

26 results

GO Term	Annotation Origin	Type
nucleic acid binding	Orthology	molecular function
DNA binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Orthology	cellular component
cytosol	Blast	cellular component
negative regulation of cell proliferation	Orthology	biological process
transferase activity	Blast	molecular function
macromolecular complex binding	Orthology	molecular function
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoskeletal part	Orthology	cellular component
microtubule cytoskeleton	Orthology	cellular component
organelle organization	Orthology	biological process
transferase activity, transferring phosphorus-containing groups	Orthology	molecular function
DNA metabolic process	Orthology	biological process
enzyme regulator activity	Orthology	molecular function
G2/M transition of mitotic cell cycle	Orthology	biological process
protein ubiquitination	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
RNA binding	Orthology	molecular function
mRNA metabolic process	Blast	biological process
metabolic process	Blast	biological process

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear chromosome	Hs	cellular component
chromosome, centromeric region	Hs	cellular component
kinetochore	Hs	cellular component
condensed chromosome kinetochore	Hs	cellular component
chromosome, telomeric region	Hs	cellular component
nuclear chromosome, telomeric region	Hs	cellular component
nucleic acid binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
chromosome	Hs	cellular component
nucleolus	Hs	cellular component
spindle	Hs	cellular component
telomere maintenance via telomerase	Hs	biological process
mitotic metaphase plate congression	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
telomerase inhibitor activity	Hs	molecular function
negative regulation of G2/M transition of mitotic cell cycle	Hs	biological process
negative regulation of protein ubiquitination	Hs	biological process
regulation of protein stability	Hs	biological process
negative regulation of telomere maintenance via telomerase	Hs	biological process
macromolecular complex binding	Hs	molecular function
negative regulation of telomerase activity	Hs	biological process
telomerase RNA binding	Hs	molecular function
negative regulation of telomere maintenance via telomere lengthening	Hs	biological process

GO (Blast)

21 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromosome	Hs	cellular component	171	6.62e-52
chromosome, centromeric region	Hs	cellular component	171	6.62e-52
kinetochore	Hs	cellular component	171	6.62e-52
condensed chromosome kinetochore	Hs	cellular component	171	6.62e-52
chromosome, telomeric region	Hs	cellular component	171	6.62e-52
nuclear chromosome, telomeric region	Hs	cellular component	171	6.62e-52
nucleic acid binding	Hs	molecular function	171	6.62e-52
DNA binding	Hs	molecular function	148	6.93e-42
mRNA (nucleoside-2'-O-)-methyltransferase activity	Hs	molecular function	42.0	2.44e-04
protein binding	Hs	molecular function	171	6.62e-52
nucleus	Hs	cellular component	171	6.62e-52
nucleoplasm	Hs	cellular component	42.0	2.44e-04
chromosome	Hs	cellular component	171	6.62e-52
nucleolus	Hs	cellular component	171	6.62e-52
spindle	Hs	cellular component	171	6.62e-52
cytosol	Hs	cellular component	42.0	2.44e-04
methyltransferase activity	Hs	molecular function	42.0	2.44e-04
telomerase inhibitor activity	Hs	molecular function	171	6.62e-52
transferase activity	Hs	molecular function	42.0	2.44e-04
macromolecular complex binding	Hs	molecular function	171	6.62e-52
telomerase RNA binding	Hs	molecular function	171	6.62e-52

GO (InterProScan)