Aniseed - Gene card

Gene Card

Best human hits

MIPEP; NLN; THOP1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008746

Gene Model ID

KH2012:KH.C8.14

Location

KhC8:225353..235201

Transcript Models and Sequences

KH2012:KH.C8.14.v1.A.ND2-1
KH2012:KH.C8.14.v2.A.ND2-1
KH2012:KH.C8.14.v3.A.ND3-1
KH2012:KH.C8.14.v4.A.SL1-1
KH2012:KH.C8.14.v5.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000008373
NCBI Reference Sequence	XM_002130584.3
NCBI Reference Sequence	XM_018813025.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

ciad009k09

Plate: R1CiGC01p02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

4 results

IPR Term	Analysis	Definition
Pept_M3A_M3B	Pfam	Peptidase M3A/M3B catalytic domain
Neurolysin/TOP_dom2	Gene3D	Neurolysin/Thimet oligopeptidase, domain 2
MetalloPept_cat_dom_sf	Gene3D	Metallopeptidase, catalytic domain superfamily
Neurolysin/TOP_N	Gene3D	Neurolysin/Thimet oligopeptidase, N-terminal

GOSlim

18 results

GO Term	Annotation Origin	Type
protein polyubiquitination	Orthology	biological process
metalloendopeptidase activity	Orthology	molecular function
extracellular region	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
mitochondrial matrix	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
proteolysis	Orthology	biological process
peptide metabolic process	Orthology	biological process
peptidase activity	Orthology	molecular function
metallopeptidase activity	Orthology	molecular function
hydrolase activity	Orthology	molecular function
metal ion binding	Orthology	molecular function
mitochondrial envelope	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
regulation of cellular metabolic process	Orthology	biological process
binding	Orthology	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein polyubiquitination	Hs	biological process
metalloendopeptidase activity	Hs	molecular function
extracellular region	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial intermembrane space	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
regulation of gluconeogenesis	Hs	biological process
proteolysis	Hs	biological process
peptide metabolic process	Hs	biological process
peptidase activity	Hs	molecular function
metallopeptidase activity	Hs	molecular function
hydrolase activity	Hs	molecular function
peptide binding	Hs	molecular function
metal ion binding	Hs	molecular function

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
metalloendopeptidase activity	Hs	molecular function	812	0.0
extracellular region	Hs	cellular component	746	0.0
cytoplasm	Hs	cellular component	812	0.0
mitochondrion	Hs	cellular component	746	0.0
mitochondrial intermembrane space	Hs	cellular component	812	0.0
mitochondrial matrix	Hs	cellular component	175	2.36e-46
cytosol	Hs	cellular component	812	0.0
plasma membrane	Hs	cellular component	746	0.0
peptidase activity	Hs	molecular function	812	0.0
metallopeptidase activity	Hs	molecular function	812	0.0
hydrolase activity	Hs	molecular function	812	0.0
peptide binding	Hs	molecular function	812	0.0
metal ion binding	Hs	molecular function	812	0.0

GO (InterProScan)