Aniseed - Gene card

External Database Gene Card

External database links

1 result

Database	Gene ID
ENSEMBL	ENSCING00000013361

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WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

1 results

Cirobu.REG.KH2012.C8:201869-203368|Atonal REG00001514 [ regulatory_region (extended_promoter) ]

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term	Analysis	Definition
bHLH_dom	SMART	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	ProSiteProfiles	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	CDD	Myc-type, basic helix-loop-helix (bHLH) domain
bHLH_dom	Pfam	Myc-type, basic helix-loop-helix (bHLH) domain
HLH_DNA-bd_sf	Gene3D	Helix-loop-helix DNA-binding domain superfamily
HLH_DNA-bd_sf	SUPERFAMILY	Helix-loop-helix DNA-binding domain superfamily

GOSlim

25 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
chromatin binding	Blast	molecular function
double-stranded DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcription coactivator activity	Blast	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
regulation of transcription from RNA polymerase II promoter	Orthology	biological process
multicellular organism development	Orthology	biological process
nervous system development	Orthology	biological process
transcription factor binding	Blast	molecular function
cell differentiation	Orthology	biological process
sequence-specific DNA binding	Blast	molecular function
protein heterodimerization activity	Blast	molecular function
protein dimerization activity	Orthology	molecular function
animal organ development	Orthology	biological process
nuclear part	Blast	cellular component
macromolecular complex	Blast	cellular component

GO (Orthology)

14 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function
neural retina development	Hs	biological process
DNA binding	Hs	molecular function
nucleus	Hs	cellular component
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
regulation of transcription from RNA polymerase II promoter	Hs	biological process
multicellular organism development	Hs	biological process
nervous system development	Hs	biological process
circadian rhythm	Hs	biological process
entrainment of circadian clock	Hs	biological process
optic nerve development	Hs	biological process
cell differentiation	Hs	biological process
protein dimerization activity	Hs	molecular function

GO (Blast)

22 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	58.2	1.02e-11
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	67.4	5.75e-16
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	58.2	1.02e-11
RNA polymerase II activating transcription factor binding	Hs	molecular function	52.4	1.35e-09
RNA polymerase II transcription coactivator activity	Hs	molecular function	52.4	1.35e-09
DNA binding	Hs	molecular function	67.4	5.75e-16
chromatin binding	Hs	molecular function	52.4	1.35e-09
double-stranded DNA binding	Hs	molecular function	52.4	1.35e-09
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	58.2	1.02e-11
transcription coactivator activity	Hs	molecular function	52.4	1.35e-09
protein binding	Hs	molecular function	52.4	1.35e-09
intracellular	Hs	cellular component	52.4	1.35e-09
nucleus	Hs	cellular component	67.4	5.75e-16
nucleoplasm	Hs	cellular component	52.4	1.35e-09
cytoplasm	Hs	cellular component	52.4	1.35e-09
transcription factor binding	Hs	molecular function	52.4	1.35e-09
chromatin DNA binding	Hs	molecular function	58.2	1.02e-11
sequence-specific DNA binding	Hs	molecular function	58.2	1.02e-11
protein heterodimerization activity	Hs	molecular function	52.4	1.35e-09
protein dimerization activity	Hs	molecular function	67.4	5.75e-16
E-box binding	Hs	molecular function	52.4	1.35e-09
RNA polymerase II transcription factor complex	Hs	cellular component	52.4	1.35e-09

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein dimerization activity	Gene3D	molecular function	2.0E-23

Gene Card

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