Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000007949
NCBI Reference Sequence	XM_009860936.2
NCBI Reference Sequence	XM_018812869.1
NCBI Reference Sequence	XM_018812870.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb033b17

Plate: R1CiGC31l24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

9 results

IPR Term	Analysis	Definition
WD40_repeat_CS	ProSitePatterns	WD40 repeat, conserved site
WD40_repeat_dom	ProSiteProfiles	WD40-repeat-containing domain
WD40_repeat	ProSiteProfiles	WD40 repeat
G-protein_beta_WD-40_rep	PRINTS	G-protein beta WD-40 repeat
WD40_repeat	Pfam	WD40 repeat
WD40/YVTN_repeat-like_dom_sf	Gene3D	WD40/YVTN repeat-like-containing domain superfamily
WD40_repeat	SMART	WD40 repeat
WD40_repeat_dom_sf	SUPERFAMILY	WD40-repeat-containing domain superfamily
Histone-bd_RBBP4_N	Pfam	Histone-binding protein RBBP4, N-terminal

GOSlim

34 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
chromatin binding	Orthology	molecular function
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
nucleolus	Blast	cellular component
cytosol	Orthology	cellular component
DNA replication	Orthology	biological process
transcription, DNA-templated	Orthology	biological process
regulation of transcription, DNA-templated	Orthology	biological process
cell cycle	Orthology	biological process
multicellular organism development	Orthology	biological process
cell proliferation	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
macromolecular complex	Orthology	cellular component
negative regulation of transcription, DNA-templated	Orthology	biological process
intracellular non-membrane-bounded organelle	Orthology	cellular component
nuclear lumen	Orthology	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
organelle organization	Orthology	biological process
hydrolase activity	Orthology	molecular function
cellular protein modification process	Orthology	biological process
DNA binding	Orthology	molecular function
nucleoside-triphosphatase activity	Orthology	molecular function
nucleoplasm part	Orthology	cellular component
cellular component organization	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
protein localization to organelle	Orthology	biological process
enzyme binding	Orthology	molecular function
negative regulation of gene expression	Orthology	biological process
response to lipid	Orthology	biological process
sequence-specific double-stranded DNA binding	Blast	molecular function

GO (Orthology)

40 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
negative regulation of transcription from RNA polymerase II promoter	Hs	biological process
nuclear chromatin	Hs	cellular component
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function
RNA binding	Hs	molecular function
histone deacetylase activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytosol	Hs	cellular component
DNA replication	Hs	biological process
chromatin organization	Hs	biological process
DNA replication-independent nucleosome assembly	Hs	biological process
chromatin remodeling	Hs	biological process
transcription, DNA-templated	Hs	biological process
regulation of transcription, DNA-templated	Hs	biological process
cell cycle	Hs	biological process
multicellular organism development	Hs	biological process
DNA-dependent ATPase activity	Hs	molecular function
cell proliferation	Hs	biological process
negative regulation of cell proliferation	Hs	biological process
histone deacetylation	Hs	biological process
Sin3 complex	Hs	cellular component
NuRD complex	Hs	cellular component
NURF complex	Hs	cellular component
negative regulation of cell growth	Hs	biological process
nucleosomal DNA binding	Hs	molecular function
chromatin assembly	Hs	biological process
macromolecular complex	Hs	cellular component
CAF-1 complex	Hs	cellular component
CENP-A containing nucleosome assembly	Hs	biological process
ESC/E(Z) complex	Hs	cellular component
histone binding	Hs	molecular function
histone deacetylase binding	Hs	molecular function
ATP-dependent chromatin remodeling	Hs	biological process
post-translational protein modification	Hs	biological process
negative regulation of gene expression, epigenetic	Hs	biological process
negative regulation of transcription, DNA-templated	Hs	biological process
response to steroid hormone	Hs	biological process
regulation of cell cycle	Hs	biological process

GO (Blast)

23 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	802	0.0
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	802	0.0
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	802	0.0
chromatin binding	Hs	molecular function	121	2.03e-30
DNA replication origin binding	Hs	molecular function	121	2.03e-30
RNA binding	Hs	molecular function	765	0.0
histone deacetylase activity	Hs	molecular function	802	0.0
protein binding	Hs	molecular function	802	0.0
nucleus	Hs	cellular component	802	0.0
nucleoplasm	Hs	cellular component	802	0.0
chromosome	Hs	cellular component	121	2.03e-30
nucleolus	Hs	cellular component	121	2.03e-30
cytosol	Hs	cellular component	802	0.0
DNA-dependent ATPase activity	Hs	molecular function	802	0.0
Sin3 complex	Hs	cellular component	802	0.0
NuRD complex	Hs	cellular component	802	0.0
NURF complex	Hs	cellular component	802	0.0
nucleosomal DNA binding	Hs	molecular function	802	0.0
macromolecular complex	Hs	cellular component	802	0.0
CAF-1 complex	Hs	cellular component	802	0.0
ESC/E(Z) complex	Hs	cellular component	802	0.0
histone binding	Hs	molecular function	802	0.0
histone deacetylase binding	Hs	molecular function	802	0.0

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	1.4E-166

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences