Aniseed - Gene card

Gene Card

Best human hits

MRPL55

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00008942

Gene Model ID

KH2012:KH.C8.32

Location

KhC8:2297369..2299964

Transcript Models and Sequences

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000002183
NCBI Reference Sequence	XM_002120350.4
NCBI Reference Sequence	XM_009860977.2
NCBI Reference Sequence	XM_009860978.2
NCBI Reference Sequence	XM_009860979.2

Collections

Gene collection 1 (N. Satoh)

1 result

cicl047j21

Plate: R1CiGC13o20

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term	Analysis	Definition
Ribosomal_L55_mit	PANTHER	Ribosomal protein L55, mitochondrial
Ribosomal_L55_mit	Pfam	Ribosomal protein L55, mitochondrial

GOSlim

5 results

GO Term	Annotation Origin	Type
structural constituent of ribosome	Orthology	molecular function
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
ribosome	Orthology	cellular component
mitochondrial matrix	Orthology	cellular component

GO (Orthology)

9 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
structural constituent of ribosome	Hs	molecular function
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
mitochondrial large ribosomal subunit	Hs	cellular component
ribosome	Hs	cellular component
translation	Hs	biological process
intracellular ribonucleoprotein complex	Hs	cellular component
mitochondrial translational elongation	Hs	biological process
mitochondrial translational termination	Hs	biological process

GO (Blast)

6 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
structural constituent of ribosome	Hs	molecular function	56.6	4.53e-11
mitochondrion	Hs	cellular component	56.6	4.53e-11
mitochondrial inner membrane	Hs	cellular component	56.6	4.53e-11
mitochondrial large ribosomal subunit	Hs	cellular component	56.6	4.53e-11
ribosome	Hs	cellular component	56.6	4.53e-11
intracellular ribonucleoprotein complex	Hs	cellular component	56.6	4.53e-11

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
structural constituent of ribosome	PANTHER	molecular function	1.7E-31
mitochondrial large ribosomal subunit	PANTHER	cellular component	1.7E-31