Aniseed - Gene card

Gene Card

Best human hits

PPP1R3B; PPP1R3C; PPP1R3D

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009027

Gene Model ID

KH2012:KH.C8.398

Location

KhC8:758402..760430

Transcript Models and Sequences

KH2012:KH.C8.398.v1.A.ND2-1
KH2012:KH.C8.398.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000018698
NCBI Reference Sequence	XM_002121547.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb015d20

Plate: R1CiGC30f06

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
CBM21_dom	Pfam	CBM21 (carbohydrate binding type-21) domain
CBM21_dom_sf	Gene3D	CBM21 domain superfamily
CBM21_dom	ProSiteProfiles	CBM21 (carbohydrate binding type-21) domain

GOSlim

12 results

GO Term	Annotation Origin	Type
protein binding	Orthology	molecular function
cytosol	Orthology	cellular component
protein dephosphorylation	Orthology	biological process
enzyme binding	Orthology	molecular function
intracellular membrane-bounded organelle	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
hydrolase activity	Orthology	molecular function
organic substance metabolic process	Orthology	biological process
oxidation-reduction process	Orthology	biological process
regulation of cellular metabolic process	Orthology	biological process
enzyme regulator activity	Orthology	molecular function

GO (Orthology)

16 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
protein phosphatase type 1 complex	Hs	cellular component
phosphoprotein phosphatase activity	Hs	molecular function
protein serine/threonine phosphatase activity	Hs	molecular function
protein binding	Hs	molecular function
cytosol	Hs	cellular component
carbohydrate metabolic process	Hs	biological process
glycogen metabolic process	Hs	biological process
glycogen biosynthetic process	Hs	biological process
regulation of glycogen catabolic process	Hs	biological process
protein dephosphorylation	Hs	biological process
protein phosphatase regulator activity	Hs	molecular function
enzyme binding	Hs	molecular function
protein phosphatase binding	Hs	molecular function
glycogen granule	Hs	cellular component
intracellular membrane-bounded organelle	Hs	cellular component
regulation of phosphoprotein phosphatase activity	Hs	biological process

GO (Blast)

10 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
protein phosphatase type 1 complex	Hs	cellular component	150	2.55e-43
phosphoprotein phosphatase activity	Hs	molecular function	150	2.55e-43
protein serine/threonine phosphatase activity	Hs	molecular function	131	1.50e-35
protein binding	Hs	molecular function	150	2.55e-43
cytosol	Hs	cellular component	131	1.50e-35
protein phosphatase regulator activity	Hs	molecular function	150	2.55e-43
enzyme binding	Hs	molecular function	150	2.55e-43
protein phosphatase binding	Hs	molecular function	131	1.50e-35
glycogen granule	Hs	cellular component	150	2.55e-43
intracellular membrane-bounded organelle	Hs	cellular component	150	2.55e-43

GO (InterProScan)