Aniseed - Gene card

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000001964
NCBI Reference Sequence	XM_002130048.4
NCBI Reference Sequence	XM_004226312.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl053p05

Plate: R1CiGC14g24

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
PCI_dom	Pfam	Proteasome component (PCI) domain
eIF3e_N	Pfam	Eukaryotic translation initiation factor 3 subunit E, N-terminal
eIF3e_N	SMART	Eukaryotic translation initiation factor 3 subunit E, N-terminal
eIF3e	Hamap	Eukaryotic translation initiation factor 3 subunit E
eIF3e	PIRSF	Eukaryotic translation initiation factor 3 subunit E
WH_DNA-bd_sf	SUPERFAMILY	Winged helix DNA-binding domain superfamily
eIF3e	PANTHER	Eukaryotic translation initiation factor 3 subunit E
PCI_dom	SMART	Proteasome component (PCI) domain

GOSlim

21 results

GO Term	Annotation Origin	Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Orthology	biological process
RNA binding	Orthology	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
translational initiation	Orthology	biological process
membrane	Orthology	cellular component
nuclear body	Orthology	cellular component
protein N-terminus binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
intracellular organelle part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
regulation of gene expression	Orthology	biological process
cytoplasmic part	Orthology	cellular component
macromolecular complex	Orthology	cellular component
ribosome	Orthology	cellular component
cell adhesion molecule binding	Orthology	molecular function
positive regulation of gene expression	Orthology	biological process
negative regulation of gene expression	Orthology	biological process

GO (Orthology)

26 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Hs	biological process
chromatin	Hs	cellular component
formation of cytoplasmic translation initiation complex	Hs	biological process
cytoplasmic translational initiation	Hs	biological process
RNA binding	Hs	molecular function
translation initiation factor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
eukaryotic translation initiation factor 3 complex	Hs	cellular component
translation	Hs	biological process
translational initiation	Hs	biological process
regulation of translational initiation	Hs	biological process
membrane	Hs	cellular component
eukaryotic 43S preinitiation complex	Hs	cellular component
nuclear body	Hs	cellular component
PML body	Hs	cellular component
eukaryotic 48S preinitiation complex	Hs	cellular component
cadherin binding	Hs	molecular function
positive regulation of translation	Hs	biological process
negative regulation of translational initiation	Hs	biological process
protein N-terminus binding	Hs	molecular function
extracellular exosome	Hs	cellular component
eukaryotic translation initiation factor 3 complex, eIF3e	Hs	cellular component

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
chromatin	Hs	cellular component	664
RNA binding	Hs	molecular function	664
translation initiation factor activity	Hs	molecular function	664
protein binding	Hs	molecular function	664
nucleus	Hs	cellular component	664
nucleoplasm	Hs	cellular component	664
cytoplasm	Hs	cellular component	664
cytosol	Hs	cellular component	664
eukaryotic translation initiation factor 3 complex	Hs	cellular component	664
membrane	Hs	cellular component	664
eukaryotic 43S preinitiation complex	Hs	cellular component	664
nuclear body	Hs	cellular component	664
PML body	Hs	cellular component	664
eukaryotic 48S preinitiation complex	Hs	cellular component	664
cadherin binding	Hs	molecular function	664
protein N-terminus binding	Hs	molecular function	664
extracellular exosome	Hs	cellular component	664
eukaryotic translation initiation factor 3 complex, eIF3e	Hs	cellular component	664

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
translation initiation factor activity	PANTHER	molecular function	3.4E-224
protein binding	Pfam	molecular function	8.5E-19
cytoplasm	PANTHER	cellular component	3.4E-224
eukaryotic translation initiation factor 3 complex	PANTHER	cellular component	3.4E-224

Gene Card

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Transcript Models and Sequences