Aniseed - Gene card

Gene Card

Best human hits

SPATA6; SPATA6L

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009087

Gene Model ID

KH2012:KH.C8.451

Location

KhC8:1647908..1659368

Transcript Models and Sequences

KH2012:KH.C8.451.v1.A.SL2-1
KH2012:KH.C8.451.v1.R.ND1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000006763
ENSEMBL	ENSCING00000023621
NCBI Reference Sequence	XM_018813003.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

2 results

cieg004e04

Plate: R1CiGC16c15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

1 result

IPR Term	Analysis	Definition
SPATA6_N	Pfam	Spermatogenesis-associated protein 6, N-terminal

GOSlim

11 results

GO Term	Annotation Origin	Type
extracellular region	Orthology	cellular component
multicellular organism development	Orthology	biological process
spermatogenesis	Orthology	biological process
cell differentiation	Orthology	biological process
cell projection	Orthology	cellular component
cytoskeletal protein binding	Orthology	molecular function
cell projection part	Orthology	cellular component
microtubule	Orthology	cellular component
macromolecular complex	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
plasma membrane region	Orthology	cellular component

GO (Orthology)

8 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
extracellular region	Hs	cellular component
multicellular organism development	Hs	biological process
spermatogenesis	Hs	biological process
cell differentiation	Hs	biological process
myosin light chain binding	Hs	molecular function
cell projection	Hs	cellular component
motile cilium assembly	Hs	biological process
sperm connecting piece	Hs	cellular component

GO (Blast)

4 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
extracellular region	Hs	cellular component	193	2.18e-55
myosin light chain binding	Hs	molecular function	193	2.18e-55
cell projection	Hs	cellular component	193	2.18e-55
sperm connecting piece	Hs	cellular component	193	2.18e-55

GO (InterProScan)