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GENE CARD

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Gene Card

Best human hits

CYB561; CYB561A3; CYBRD1

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009094

Gene Model ID

KH2012:KH.C8.458

Location

KhC8:6271736..6277836

Transcript Models and Sequences

  KH2012:KH.C8.458.v1.A.SL2-1
KH2012:KH.C8.458.v2.A.SL2-1
KH2012:KH.C8.458.v2.R.ND1-1
KH2012:KH.C8.458.v3.A.SL3-1
KH2012:KH.C8.458.v4.A.SL3-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000002084
NCBI Reference Sequence NM_001047984.1
Collections

Gateway full ORF

2 results

cien29036

Plate: VES74_H22

cien57770

Plate: VES79_O08

Gene collection 1 (N. Satoh)

2 results

cieg055p24

Plate: R1CiGC24b19

cieg056c06

Plate: R1CiGC24d19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
Cyt_b561/ferric_Rdtase_TM SMART Cytochrome b561/ferric reductase transmembrane
Cyt_b561/ferric_Rdtase_TM Pfam Cytochrome b561/ferric reductase transmembrane
Cyt_b561/ferric_Rdtase_TM ProSiteProfiles Cytochrome b561/ferric reductase transmembrane

GOSlim

16 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
lysosome Blast cellular component
lysosomal membrane Orthology cellular component
endosome Blast cellular component
plasma membrane Blast cellular component
membrane Orthology cellular component
integral component of membrane Orthology cellular component
brush border membrane Blast cellular component
metal ion binding Orthology molecular function
oxidation-reduction process Orthology biological process
extracellular exosome Blast cellular component
catalytic activity Orthology molecular function
cellular metabolic process Orthology biological process
intracellular organelle part Blast cellular component
whole membrane Blast cellular component
bounding membrane of organelle Blast cellular component

GO (Orthology)

9 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ferric-chelate reductase activity Hs molecular function
protein binding Hs molecular function
lysosomal membrane Hs cellular component
membrane Hs cellular component
integral component of membrane Hs cellular component
oxidoreductase activity Hs molecular function
electron transport chain Hs biological process
metal ion binding Hs molecular function
oxidation-reduction process Hs biological process

GO (Blast)

14 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ferric-chelate reductase activity Hs molecular function 217 1.01e-69
protein binding Hs molecular function 217 1.01e-69
lysosome Hs cellular component 199 2.27e-63
lysosomal membrane Hs cellular component 217 1.01e-69
endosome Hs cellular component 199 2.27e-63
plasma membrane Hs cellular component 166 2.61e-50
membrane Hs cellular component 217 1.01e-69
integral component of membrane Hs cellular component 217 1.01e-69
oxidoreductase activity Hs molecular function 217 1.01e-69
oxidoreductase activity, oxidizing metal ions Hs molecular function 166 2.61e-50
brush border membrane Hs cellular component 166 2.61e-50
late endosome membrane Hs cellular component 199 2.27e-63
metal ion binding Hs molecular function 217 1.01e-69
extracellular exosome Hs cellular component 166 2.61e-50

GO (InterProScan)

No result

GO Term Analysis Type e-value

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