Aniseed - Gene card

Gene Card

Best human hits

TIMM13; TIMM8A; TIMM8B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009147

Gene Model ID

KH2012:KH.C8.506

Location

KhC8:5414294..5415632

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000020253
NCBI Reference Sequence	XM_002130057.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl054h02

Plate: R1CiGC14m16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
Tim10-like_dom_sf	Gene3D	Tim10-like domain superfamily
Tim10-like	Pfam	Tim10-like
Tim10-like_dom_sf	SUPERFAMILY	Tim10-like domain superfamily

GOSlim

20 results

GO Term	Annotation Origin	Type
protein binding	Blast	molecular function
extracellular space	Blast	cellular component
mitochondrion	Orthology	cellular component
mitochondrial inner membrane	Orthology	cellular component
sensory perception of sound	Orthology	biological process
zinc ion binding	Orthology	molecular function
protein transport	Orthology	biological process
membrane	Orthology	cellular component
metal ion transport	Blast	biological process
metal ion binding	Orthology	molecular function
nucleolus	Orthology	cellular component
organelle organization	Orthology	biological process
establishment of protein localization to organelle	Orthology	biological process
protein targeting	Orthology	biological process
mitochondrial envelope	Orthology	cellular component
macromolecular complex	Orthology	cellular component
intracellular organelle lumen	Orthology	cellular component
establishment of protein localization to membrane	Orthology	biological process
membrane organization	Orthology	biological process
transmembrane transport	Blast	biological process

GO (Orthology)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
fibrillar center	Hs	cellular component
mitochondrion	Hs	cellular component
mitochondrial inner membrane	Hs	cellular component
protein targeting to mitochondrion	Hs	biological process
sensory perception of sound	Hs	biological process
zinc ion binding	Hs	molecular function
protein transporter activity	Hs	molecular function
protein transport	Hs	biological process
membrane	Hs	cellular component
mitochondrial intermembrane space protein transporter complex	Hs	cellular component
protein import into mitochondrial inner membrane	Hs	biological process
metal ion binding	Hs	molecular function
chaperone-mediated protein transport	Hs	biological process

GO (Blast)

12 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
fibrillar center	Hs	cellular component	77.0	4.28e-20
protein binding	Hs	molecular function	43.1	1.08e-06
extracellular space	Hs	cellular component	43.5	5.81e-07
mitochondrion	Hs	cellular component	77.0	4.28e-20
mitochondrial inner membrane	Hs	cellular component	77.0	4.28e-20
mitochondrial intermembrane space	Hs	cellular component	43.1	1.08e-06
zinc ion binding	Hs	molecular function	77.0	4.28e-20
protein transporter activity	Hs	molecular function	77.0	4.28e-20
membrane	Hs	cellular component	77.0	4.28e-20
mitochondrial intermembrane space protein transporter complex	Hs	cellular component	77.0	4.28e-20
metal ion binding	Hs	molecular function	77.0	4.28e-20
metal ion transmembrane transporter activity	Hs	molecular function	43.5	5.81e-07

GO (InterProScan)