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GENE CARD

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Gene Card

Best human hits

TRPC3; TRPC4; TRPC5

Unique Gene ID

Cirobu.g00009218

Gene Model ID

KH2012:KH.C8.571

Location

KhC8:1912382..1924491

Transcript Models and Sequences

  KH2012:KH.C8.571.v1.A.SL1-1

External Database Gene Card

External database links

1 result

Database Gene ID
ENSEMBL ENSCING00000002065
Collections

Gateway full ORF

3 results

cima888594

Plate: VES70_L05

cien128180

Plate: VES90_F08

cien136752

Plate: VES91_M18

Gene collection 1 (N. Satoh)

2 results

cieg003f21

Plate: R1CiGC15j04

cieg098i06

Plate: R1CiGC40j20

WashU Genome Browser

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Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

8 results

IPR Term Analysis Definition
Ankyrin_rpt-contain_sf Gene3D Ankyrin repeat-containing domain superfamily
TRPC_channel PRINTS Transient receptor potential channel, canonical
Ankyrin_rpt-contain_dom Pfam Ankyrin repeat-containing domain
Ankyrin_rpt-contain_sf SUPERFAMILY Ankyrin repeat-containing domain superfamily
Ankyrin_rpt SMART Ankyrin repeat
TRPC_channel PANTHER Transient receptor potential channel, canonical
Ankyrin_rpt-contain_dom CDD Ankyrin repeat-containing domain
Ion_trans_dom Pfam Ion transport domain

GOSlim

27 results

GO Term Annotation Origin Type
actin binding Blast molecular function
protein binding Blast molecular function
cytoplasm Blast cellular component
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
ion transport Blast biological process
cell surface Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
neuronal cell body Blast cellular component
membrane raft Blast cellular component
transmembrane transport Blast biological process
metal ion transport Blast biological process
plasma membrane region Blast cellular component
cell junction Blast cellular component
cell projection part Blast cellular component
axon Blast cellular component
cytoplasmic part Blast cellular component
cell periphery Blast cellular component
cytoskeleton Blast cellular component
macromolecular complex Blast cellular component
cytoskeletal protein binding Blast molecular function
cell adhesion molecule binding Blast molecular function
enzyme binding Blast molecular function
small molecule binding Blast molecular function
anion binding Blast molecular function

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
actin binding Hs molecular function 264 5.05e-74
ion channel activity Hs molecular function 264 5.05e-74
calcium channel activity Hs molecular function 264 5.05e-74
protein binding Hs molecular function 264 5.05e-74
cytoplasm Hs cellular component 264 5.05e-74
plasma membrane Hs cellular component 264 5.05e-74
integral component of plasma membrane Hs cellular component 264 5.05e-74
caveola Hs cellular component 219 6.17e-59
cell-cell junction Hs cellular component 219 6.17e-59
beta-catenin binding Hs molecular function 219 6.17e-59
cell surface Hs cellular component 219 6.17e-59
store-operated calcium channel activity Hs molecular function 264 5.05e-74
membrane Hs cellular component 264 5.05e-74
integral component of membrane Hs cellular component 264 5.05e-74
basolateral plasma membrane Hs cellular component 219 6.17e-59
clathrin binding Hs molecular function 264 5.05e-74
dendrite Hs cellular component 264 5.05e-74
growth cone Hs cellular component 264 5.05e-74
cortical cytoskeleton Hs cellular component 219 6.17e-59
calcium channel complex Hs cellular component 264 5.05e-74
actinin binding Hs molecular function 264 5.05e-74
neuronal cell body Hs cellular component 264 5.05e-74
membrane raft Hs cellular component 264 5.05e-74
cadherin binding Hs molecular function 219 6.17e-59
ATPase binding Hs molecular function 264 5.05e-74
inositol 1,4,5 trisphosphate binding Hs molecular function 264 5.05e-74

GO (InterProScan)

7 results

GO Term Analysis Type e-value
ion channel activity Pfam molecular function 4.3E-13
calcium channel activity PANTHER molecular function 3.5E-149
protein binding SMART molecular function 0.052
ion transport Pfam biological process 4.3E-13
membrane PANTHER cellular component 3.5E-149
transmembrane transport Pfam biological process 4.3E-13
calcium ion transmembrane transport PANTHER biological process 3.5E-149