Login
Help

GENE CARD

Submit your Data

Gene Card

Best human hits

SLC10A1; SLC10A2; SLC10A4

Unique Gene ID

Cirobu.g00009287

Gene Model ID

KH2012:KH.C8.635

Location

KhC8:1477287..1481420

Transcript Models and Sequences

  KH2012:KH.C8.635.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cien103088

Plate: VES86_H11

cien221561

Plate: VES104_M13

Gene collection 1 (N. Satoh)

1 result

citb033f20

Plate: R1CiGC31n16

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.
 Click here to see how you can interact with this tree

 Click here to see the tree inference method

Gene Annotations

InterPro

3 results

IPR Term Analysis Definition
BilAc:Na_symport/Acr3 Pfam Bile acid:sodium symporter/arsenical resistance protein Acr3
Bilac:Na_transpt PANTHER Bile acid:sodium symporter
SLC10A1 PANTHER Solute carrier family 10 member 1

GOSlim

14 results

GO Term Annotation Origin Type
plasma membrane Blast cellular component
integral component of plasma membrane Blast cellular component
ion transport Blast biological process
sodium ion transport Blast biological process
membrane Blast cellular component
integral component of membrane Blast cellular component
basolateral plasma membrane Blast cellular component
apical plasma membrane Blast cellular component
transmembrane transport Blast biological process
binding Blast molecular function
plasma membrane region Blast cellular component
cell projection Blast cellular component
cytoskeletal part Blast cellular component
organic substance transport Blast biological process

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
virus receptor activity Hs molecular function 197 7.66e-59
plasma membrane Hs cellular component 197 7.66e-59
integral component of plasma membrane Hs cellular component 197 7.66e-59
microvillus Hs cellular component 188 2.41e-55
bile acid:sodium symporter activity Hs molecular function 197 7.66e-59
bile acid transmembrane transporter activity Hs molecular function 197 7.66e-59
symporter activity Hs molecular function 197 7.66e-59
membrane Hs cellular component 197 7.66e-59
integral component of membrane Hs cellular component 197 7.66e-59
basolateral plasma membrane Hs cellular component 197 7.66e-59
apical plasma membrane Hs cellular component 188 2.41e-55

GO (InterProScan)

3 results

GO Term Analysis Type e-value
bile acid:sodium symporter activity PANTHER molecular function 5.4E-115
bile acid and bile salt transport PANTHER biological process 5.4E-115
membrane PANTHER cellular component 5.4E-115