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GENE CARD

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Gene Card

Best human hits

COMMD6; COMMD8; COMMD9

Unique Gene ID

Cirobu.g00009468

Gene Model ID

KH2012:KH.C8.799

Location

KhC8:3122764..3123576

Transcript Models and Sequences

  KH2012:KH.C8.799.v1.A.ND1-1

External Database Gene Card

External database links

No result

Collections

Gateway full ORF

4 results

cien112835

Plate: VES88_K01

cima879426

Plate: VES68_E12

cien154333

Plate: VES94_H04

cien192272

Plate: VES100_A03

Gene collection 1 (N. Satoh)

1 result

cicl001j16

Plate: R1CiGC08a04

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
COMM Pfam COMM domain
COMM ProSiteProfiles COMM domain

GOSlim

14 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
extracellular region Blast cellular component
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
Golgi apparatus Blast cellular component
cytosol Orthology cellular component
transcription, DNA-templated Orthology biological process
regulation of transcription, DNA-templated Orthology biological process
cytoplasmic vesicle Blast cellular component
intracellular organelle part Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component
transcription factor binding Blast molecular function

GO (Orthology)

7 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
cytosol Hs cellular component
transcription, DNA-templated Hs biological process
regulation of transcription, DNA-templated Hs biological process

GO (Blast)

11 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
protein binding Hs molecular function 64.7 1.42e-14
extracellular region Hs cellular component 38.1 1.37e-04
nucleus Hs cellular component 64.7 1.42e-14
nucleoplasm Hs cellular component 64.7 1.42e-14
cytoplasm Hs cellular component 64.7 1.42e-14
Golgi apparatus Hs cellular component 38.1 1.37e-04
cytosol Hs cellular component 64.7 1.42e-14
cytoplasmic vesicle Hs cellular component 38.1 1.37e-04
secretory granule lumen Hs cellular component 38.1 1.37e-04
NF-kappaB binding Hs molecular function 36.6 2.07e-04
ficolin-1-rich granule lumen Hs cellular component 38.1 1.37e-04

GO (InterProScan)

No result

GO Term Analysis Type e-value