Aniseed - Gene card

Gene Card

Best human hits

BAG3; BAG4; BAG5

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009524

Gene Model ID

KH2012:KH.C8.85

Location

KhC8:4881217..4884868

Transcript Models and Sequences

KH2012:KH.C8.85.v1.A.SL1-2
KH2012:KH.C8.85.v2.A.nonSL4-2
KH2012:KH.C8.85.v2.A.nonSL6-2
KH2012:KH.C8.85.v2.A.SL5-2
KH2012:KH.C8.85.v2.A.SL7-2
KH2012:KH.C8.85.v2.A.SL8-2
KH2012:KH.C8.85.v2.R.ND3-2
KH2012:KH.C8.85.v3.A.SL1-1
KH2012:KH.C8.85.v4.A.SL1-1
KH2012:KH.C8.85.v5.A.ND2-1
KH2012:KH.C8.85.v5.A.nonSL4-1
KH2012:KH.C8.85.v5.A.nonSL6-1
KH2012:KH.C8.85.v5.A.SL5-1
KH2012:KH.C8.85.v5.A.SL7-1
KH2012:KH.C8.85.v5.A.SL8-1

External Database Gene Card

External database links

6 results

Database	Gene ID
NCBI Reference Sequence	XM_002128355.3
NCBI Reference Sequence	XM_009861069.2
NCBI Reference Sequence	XM_009861070.2
NCBI Reference Sequence	XM_018812968.1
NCBI Reference Sequence	XM_018812969.1
NCBI Reference Sequence	XM_018812970.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl048k15

Plate: R1CiGC13l17

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

11 results

IPR Term	Analysis	Definition
WW_dom	ProSitePatterns	WW domain
WW_dom	ProSiteProfiles	WW domain
WW_dom	SMART	WW domain
WW_dom	Pfam	WW domain
WW_dom_sf	SUPERFAMILY	WW domain superfamily
WW_dom	CDD	WW domain
BAG_domain	ProSiteProfiles	BAG domain
BAG_domain	SMART	BAG domain
BAG_dom_sf	Gene3D	BAG domain superfamily
BAG_dom_sf	SUPERFAMILY	BAG domain superfamily
BAG_domain	Pfam	BAG domain

GOSlim

30 results

GO Term	Annotation Origin	Type
RNA binding	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Blast	cellular component
cytosol	Orthology	cellular component
plasma membrane	Orthology	cellular component
protein folding	Orthology	biological process
apoptotic process	Orthology	biological process
brain development	Orthology	biological process
membrane	Blast	cellular component
protein kinase binding	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
neuron projection	Orthology	cellular component
negative regulation of apoptotic process	Orthology	biological process
perinuclear region of cytoplasm	Blast	cellular component
regulation of catalytic activity	Orthology	biological process
nucleoside-triphosphatase regulator activity	Orthology	molecular function
adenyl nucleotide binding	Orthology	molecular function
cell surface receptor signaling pathway	Orthology	biological process
animal organ development	Orthology	biological process
central nervous system development	Orthology	biological process
organelle part	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular non-membrane-bounded organelle	Orthology	cellular component
cellular response to stress	Orthology	biological process
cell adhesion molecule binding	Orthology	molecular function
intracellular protein transport	Orthology	biological process
negative regulation of transcription from RNA polymerase II promoter	Orthology	biological process
intracellular part	Blast	cellular component

GO (Orthology)

24 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
adenyl-nucleotide exchange factor activity	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
plasma membrane	Hs	cellular component
protein folding	Hs	biological process
apoptotic process	Hs	biological process
brain development	Hs	biological process
extrinsic apoptotic signaling pathway via death domain receptors	Hs	biological process
spinal cord development	Hs	biological process
Z disc	Hs	cellular component
cellular response to heat	Hs	biological process
positive regulation of transcription factor import into nucleus	Hs	biological process
neuron projection	Hs	cellular component
negative regulation of apoptotic process	Hs	biological process
cadherin binding	Hs	molecular function
positive regulation of protein export from nucleus	Hs	biological process
regulation of catalytic activity	Hs	biological process
protein stabilization	Hs	biological process
chaperone binding	Hs	molecular function
cellular response to mechanical stimulus	Hs	biological process
extrinsic apoptotic signaling pathway in absence of ligand	Hs	biological process
negative regulation of transcription from RNA polymerase II promoter in response to stress	Hs	biological process

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
adenyl-nucleotide exchange factor activity	Hs	molecular function	67.8	1.17e-12
RNA binding	Hs	molecular function	67.8	1.17e-12
signal transducer activity, downstream of receptor	Hs	molecular function	67.8	1.17e-12
protein binding	Hs	molecular function	67.8	1.17e-12
nucleus	Hs	cellular component	67.8	1.17e-12
cytoplasm	Hs	cellular component	67.8	1.17e-12
mitochondrion	Hs	cellular component	60.8	2.48e-10
cytosol	Hs	cellular component	67.8	1.17e-12
plasma membrane	Hs	cellular component	67.8	1.17e-12
membrane	Hs	cellular component	60.8	2.48e-10
inclusion body	Hs	cellular component	60.8	2.48e-10
protein kinase binding	Hs	molecular function	60.8	2.48e-10
Z disc	Hs	cellular component	67.0	2.65e-12
ubiquitin protein ligase binding	Hs	molecular function	67.8	1.17e-12
neuron projection	Hs	cellular component	67.0	2.65e-12
cadherin binding	Hs	molecular function	67.0	2.65e-12
perinuclear region of cytoplasm	Hs	cellular component	60.8	2.48e-10
chaperone binding	Hs	molecular function	67.8	1.17e-12

GO (InterProScan)