Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
NCBI Reference Sequence	XM_018813430.1
NCBI Reference Sequence	XM_018813431.1

Collections

Gene collection 1 (N. Satoh)

1 result

cicl016e06

Plate: R1CiGC10g08

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

17 results

IPR Term	Analysis	Definition
Fibrinogen_CS	ProSitePatterns	Fibrinogen, conserved site
FN3_dom	CDD	Fibronectin type III
FN3_dom	ProSiteProfiles	Fibronectin type III
Ig-like_fold	Gene3D	Immunoglobulin-like fold
FN3_sf	SUPERFAMILY	Fibronectin type III superfamily
TNR	PANTHER	Tenascin-R
FN3_dom	Pfam	Fibronectin type III
EGF-like_CS	ProSitePatterns	EGF-like, conserved site
Fibrinogen_a/b/g_C_dom	SMART	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen-like_C	SUPERFAMILY	Fibrinogen-like, C-terminal
EGF-like_dom	SMART	EGF-like domain
EGF_extracell	Pfam	EGF-like domain, extracellular
EGF-like_dom	ProSiteProfiles	EGF-like domain
Fibrinogen_a/b/g_C_dom	CDD	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom	Pfam	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
Fibrinogen_a/b/g_C_dom	ProSiteProfiles	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
FN3_dom	SMART	Fibronectin type III

GOSlim

25 results

GO Term	Annotation Origin	Type
integrin binding	Orthology	molecular function
protein binding	Orthology	molecular function
extracellular region	Orthology	cellular component
extracellular space	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
focal adhesion	Blast	cellular component
cell adhesion	Orthology	biological process
axonogenesis	Orthology	biological process
cell surface	Orthology	cellular component
membrane	Blast	cellular component
identical protein binding	Orthology	molecular function
neuron projection	Orthology	cellular component
neuronal cell body	Orthology	cellular component
membrane raft	Blast	cellular component
cell development	Orthology	biological process
negative regulation of cell proliferation	Orthology	biological process
cell differentiation	Orthology	biological process
neuron development	Orthology	biological process
cell projection part	Orthology	cellular component
axon	Orthology	cellular component
synapse part	Orthology	cellular component
cell migration	Orthology	biological process
generation of neurons	Orthology	biological process
extracellular region part	Blast	cellular component
carbohydrate derivative binding	Blast	molecular function

GO (Orthology)

17 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
osteoblast development	Hs	biological process
integrin binding	Hs	molecular function
protein binding	Hs	molecular function
extracellular region	Hs	cellular component
proteinaceous extracellular matrix	Hs	cellular component
cell-matrix adhesion	Hs	biological process
axonogenesis	Hs	biological process
cell surface	Hs	cellular component
negative regulation of osteoblast proliferation	Hs	biological process
identical protein binding	Hs	molecular function
neuron projection	Hs	cellular component
neuronal cell body	Hs	cellular component
negative regulation of osteoblast differentiation	Hs	biological process
dendrite self-avoidance	Hs	biological process
CA3 pyramidal cell dendrite	Hs	cellular component
hippocampal mossy fiber expansion	Hs	cellular component
negative regulation of neuron migration	Hs	biological process

GO (Blast)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
integrin binding	Hs	molecular function	447	1.22e-131
protein binding	Hs	molecular function	799	0.0
extracellular region	Hs	cellular component	799	0.0
proteinaceous extracellular matrix	Hs	cellular component	799	0.0
basement membrane	Hs	cellular component	799	0.0
interstitial matrix	Hs	cellular component	799	0.0
extracellular space	Hs	cellular component	799	0.0
endoplasmic reticulum lumen	Hs	cellular component	799	0.0
focal adhesion	Hs	cellular component	799	0.0
cell surface	Hs	cellular component	478	3.97e-142
membrane	Hs	cellular component	799	0.0
extracellular matrix	Hs	cellular component	799	0.0
identical protein binding	Hs	molecular function	447	1.22e-131
neuron projection	Hs	cellular component	447	1.22e-131
neuronal cell body	Hs	cellular component	447	1.22e-131
membrane raft	Hs	cellular component	478	3.97e-142
syndecan binding	Hs	molecular function	799	0.0
perineuronal net	Hs	cellular component	478	3.97e-142
CA3 pyramidal cell dendrite	Hs	cellular component	447	1.22e-131
hippocampal mossy fiber expansion	Hs	cellular component	447	1.22e-131

GO (InterProScan)

4 results

GO Term	Analysis	Type	e-value
protein binding	SUPERFAMILY	molecular function	1.93E-23
proteinaceous extracellular matrix	PANTHER	cellular component	2.3E-215
cell adhesion	PANTHER	biological process	2.3E-215
regulation of neurogenesis	PANTHER	biological process	2.3E-215

Gene Card

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