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Gene Card

Best human hits

MVB12A; MVB12B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009743

Gene Model ID

KH2012:KH.C9.217

Location

KhC9:2173387..2176739

Transcript Models and Sequences

  KH2012:KH.C9.217.v1.A.ND1-1
KH2012:KH.C9.217.v1.A.nonSL2-1
KH2012:KH.C9.217.v1.A.nonSL3-1
KH2012:KH.C9.217.v1.A.nonSL4-1
KH2012:KH.C9.217.v1.A.nonSL5-1
KH2012:KH.C9.217.v1.A.nonSL6-1
KH2012:KH.C9.217.v1.A.nonSL7-1
KH2012:KH.C9.217.v1.A.nonSL8-1
KH2012:KH.C9.217.v1.A.nonSL9-1

External Database Gene Card

External database links

2 results

Database Gene ID
ENSEMBL ENSCING00000005543
NCBI Reference Sequence XM_002121649.3
Collections

Gateway full ORF

1 result

cien122117

Plate: VES89_N09

Gene collection 1 (N. Satoh)

2 results

cicl030d17

Plate: R1CiGC12o23

cieg007l16

Plate: R1CiGC16j21

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

2 results

IPR Term Analysis Definition
MABP ProSiteProfiles MABP domain
MVB12A/B Pfam Multivesicular body subunit 12

GOSlim

27 results

GO Term Annotation Origin Type
protein binding Orthology molecular function
nucleus Orthology cellular component
nucleoplasm Orthology cellular component
cytoplasm Orthology cellular component
endosome Orthology cellular component
early endosome Orthology cellular component
Golgi apparatus Orthology cellular component
centrosome Orthology cellular component
microtubule organizing center Orthology cellular component
cytosol Orthology cellular component
cytoskeleton Orthology cellular component
plasma membrane Orthology cellular component
protein transport Orthology biological process
membrane Orthology cellular component
vesicle Orthology cellular component
extracellular exosome Orthology cellular component
membrane part Orthology cellular component
intracellular organelle part Orthology cellular component
whole membrane Orthology cellular component
bounding membrane of organelle Orthology cellular component
macromolecular complex Orthology cellular component
binding Orthology molecular function
intracellular transport Orthology biological process
cell surface receptor signaling pathway Orthology biological process
regulation of signal transduction Orthology biological process
vacuole Orthology cellular component
proteolysis Orthology biological process

GO (Orthology)

29 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type
ESCRT I complex Hs cellular component
protein binding Hs molecular function
nucleus Hs cellular component
nucleoplasm Hs cellular component
cytoplasm Hs cellular component
endosome Hs cellular component
early endosome Hs cellular component
late endosome Hs cellular component
Golgi apparatus Hs cellular component
centrosome Hs cellular component
microtubule organizing center Hs cellular component
cytosol Hs cellular component
cytoskeleton Hs cellular component
plasma membrane Hs cellular component
lipid binding Hs molecular function
endosome membrane Hs cellular component
protein transport Hs biological process
membrane Hs cellular component
endosomal transport Hs biological process
macroautophagy Hs biological process
SH3 domain binding Hs molecular function
late endosome membrane Hs cellular component
vesicle Hs cellular component
multivesicular body assembly Hs biological process
regulation of epidermal growth factor receptor signaling pathway Hs biological process
ubiquitin binding Hs molecular function
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway Hs biological process
host cell Hs cellular component
extracellular exosome Hs cellular component

GO (Blast)

23 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae		 Type Score E-value
ESCRT I complex Hs cellular component 161 2.53e-48
protein binding Hs molecular function 161 2.53e-48
nucleus Hs cellular component 161 2.53e-48
nucleoplasm Hs cellular component 68.6 1.23e-13
cytoplasm Hs cellular component 68.6 1.23e-13
endosome Hs cellular component 161 2.53e-48
early endosome Hs cellular component 161 2.53e-48
late endosome Hs cellular component 161 2.53e-48
Golgi apparatus Hs cellular component 68.6 1.23e-13
centrosome Hs cellular component 68.6 1.23e-13
microtubule organizing center Hs cellular component 68.6 1.23e-13
cytosol Hs cellular component 161 2.53e-48
cytoskeleton Hs cellular component 68.6 1.23e-13
plasma membrane Hs cellular component 161 2.53e-48
lipid binding Hs molecular function 161 2.53e-48
endosome membrane Hs cellular component 161 2.53e-48
membrane Hs cellular component 161 2.53e-48
SH3 domain binding Hs molecular function 68.6 1.23e-13
late endosome membrane Hs cellular component 161 2.53e-48
vesicle Hs cellular component 161 2.53e-48
ubiquitin binding Hs molecular function 68.6 1.23e-13
host cell Hs cellular component 161 2.53e-48
extracellular exosome Hs cellular component 161 2.53e-48

GO (InterProScan)

1 result

GO Term Analysis Type e-value
ESCRT I complex Pfam cellular component 4.4E-70

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