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GENE CARD

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Gene Card

Best human hits

HPCA; HPCAL1; NCS1

Unique Gene ID

Cirobu.g00009805

Gene Model ID

KH2012:KH.C9.274

Location

KhC9:2337710..2342120

Transcript Models and Sequences

  KH2012:KH.C9.274.v1.A.SL1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

2 results

cien137398

Plate: VES91_I19

cien203568

Plate: VES101_N23

Gene collection 1 (N. Satoh)

2 results

cicl046i23

Plate: R1CiGC13e10

ciad071l01

Plate: R1CiGC07i07

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

6 results

IPR Term Analysis Definition
EF_hand_dom ProSiteProfiles EF-hand domain
EF_Hand_1_Ca_BS ProSitePatterns EF-Hand 1, calcium-binding site
EF-hand-dom_pair SUPERFAMILY EF-hand domain pair
EF_hand_dom SMART EF-hand domain
EF_hand_dom Pfam EF-hand domain
EF_hand_dom CDD EF-hand domain

GOSlim

38 results

GO Term Annotation Origin Type
magnesium ion binding Orthology molecular function
actin binding Blast molecular function
calcium ion binding Orthology molecular function
protein binding Orthology molecular function
cytoplasm Orthology cellular component
Golgi apparatus Orthology cellular component
cytosol Orthology cellular component
plasma membrane Orthology cellular component
membrane Orthology cellular component
kinase binding Blast molecular function
protein kinase binding Orthology molecular function
cell junction Orthology cellular component
axon Orthology cellular component
cytoplasmic vesicle Orthology cellular component
identical protein binding Blast molecular function
intracellular membrane-bounded organelle Orthology cellular component
synapse Orthology cellular component
postsynaptic membrane Orthology cellular component
metal ion binding Orthology molecular function
perinuclear region of cytoplasm Orthology cellular component
extracellular exosome Orthology cellular component
metal ion transport Orthology biological process
transmembrane transport Orthology biological process
neuron projection development Orthology biological process
organelle Orthology cellular component
postsynapse Orthology cellular component
neuron part Orthology cellular component
endomembrane system Orthology cellular component
organelle organization Orthology biological process
membrane organization Orthology biological process
intracellular signal transduction Orthology biological process
membrane part Blast cellular component
cell projection membrane Blast cellular component
cell leading edge Blast cellular component
neuron projection Blast cellular component
neuronal cell body Blast cellular component
plasma membrane part Blast cellular component
cytoplasmic part Blast cellular component

GO (Orthology)

26 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type
magnesium ion binding Hs molecular function
voltage-gated calcium channel activity Hs molecular function
calcium ion binding Hs molecular function
protein binding Hs molecular function
cytoplasm Hs cellular component
Golgi apparatus Hs cellular component
cytosol Hs cellular component
plasma membrane Hs cellular component
regulation of neuron projection development Hs biological process
postsynaptic density Hs cellular component
membrane Hs cellular component
protein kinase binding Hs molecular function
cell junction Hs cellular component
axon Hs cellular component
dendrite Hs cellular component
dense core granule Hs cellular component
cytoplasmic vesicle Hs cellular component
intracellular membrane-bounded organelle Hs cellular component
synapse Hs cellular component
postsynaptic membrane Hs cellular component
positive regulation of exocytosis Hs biological process
metal ion binding Hs molecular function
phosphatidylinositol-mediated signaling Hs biological process
perinuclear region of cytoplasm Hs cellular component
extracellular exosome Hs cellular component
calcium ion transmembrane transport Hs biological process

GO (Blast)

31 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
magnesium ion binding Hs molecular function 276 5.27e-96
actin binding Hs molecular function 239 1.97e-81
voltage-gated calcium channel activity Hs molecular function 276 5.27e-96
calcium ion binding Hs molecular function 276 5.27e-96
protein binding Hs molecular function 276 5.27e-96
cytoplasm Hs cellular component 276 5.27e-96
Golgi apparatus Hs cellular component 276 5.27e-96
cytosol Hs cellular component 276 5.27e-96
plasma membrane Hs cellular component 276 5.27e-96
postsynaptic density Hs cellular component 276 5.27e-96
membrane Hs cellular component 276 5.27e-96
extrinsic component of membrane Hs cellular component 239 1.97e-81
kinase binding Hs molecular function 239 1.97e-81
protein kinase binding Hs molecular function 276 5.27e-96
cell junction Hs cellular component 276 5.27e-96
axon Hs cellular component 276 5.27e-96
dendrite Hs cellular component 276 5.27e-96
dense core granule Hs cellular component 276 5.27e-96
cytoplasmic vesicle Hs cellular component 276 5.27e-96
dendrite membrane Hs cellular component 239 1.97e-81
neuronal cell body membrane Hs cellular component 239 1.97e-81
dendrite cytoplasm Hs cellular component 239 1.97e-81
identical protein binding Hs molecular function 239 1.97e-81
perikaryon Hs cellular component 239 1.97e-81
intracellular membrane-bounded organelle Hs cellular component 276 5.27e-96
dendritic spine head Hs cellular component 239 1.97e-81
synapse Hs cellular component 276 5.27e-96
postsynaptic membrane Hs cellular component 276 5.27e-96
metal ion binding Hs molecular function 276 5.27e-96
perinuclear region of cytoplasm Hs cellular component 276 5.27e-96
extracellular exosome Hs cellular component 276 5.27e-96

GO (InterProScan)

1 result

GO Term Analysis Type e-value
calcium ion binding Pfam molecular function 1.4E-17