Gene Card
Best human hits
CDK12; CDK13; CDK9
Unique Gene ID
Cirobu.g00009849
Gene Model ID
KH2012:KH.C9.315
Location
KhC9:3639351..3652762
External database links
2 results
| Database | Gene ID |
|---|---|
| ENSEMBL | ENSCING00000013019 |
| NCBI Reference Sequence | XR_001974901.1 |
Gateway full ORF
2 results
cien58858
Plate: VES79_G12
cien116672
Plate: VES88_M14
Gene collection 1 (N. Satoh)
4 results
cieg001l07
Plate: R1CiGC15h23
cilv016n15
Plate: R1CiGC26m04
cieg025e08
Plate: R1CiGC19h05
cieg025m04
Plate: R1CiGC19l19
n/a
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Click here to see the tree inference method
InterPro
5 results
| IPR Term | Analysis | Definition |
|---|---|---|
| Prot_kinase_dom | SMART | Protein kinase domain |
| Kinase-like_dom_sf | SUPERFAMILY | Protein kinase-like domain superfamily |
| Ser/Thr_kinase_AS | ProSitePatterns | Serine/threonine-protein kinase, active site |
| Prot_kinase_dom | Pfam | Protein kinase domain |
| Prot_kinase_dom | ProSiteProfiles | Protein kinase domain |
GOSlim
38 results
| GO Term | Annotation Origin | Type |
|---|---|---|
| nucleotide binding | Blast | molecular function |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Blast | molecular function |
| DNA binding | Blast | molecular function |
| chromatin binding | Blast | molecular function |
| RNA binding | Blast | molecular function |
| protein kinase activity | Blast | molecular function |
| protein serine/threonine kinase activity | Blast | molecular function |
| protein binding | Blast | molecular function |
| ATP binding | Blast | molecular function |
| extracellular region | Blast | cellular component |
| extracellular space | Blast | cellular component |
| nucleus | Blast | cellular component |
| nucleoplasm | Blast | cellular component |
| cytoplasm | Blast | cellular component |
| Golgi apparatus | Blast | cellular component |
| cytosol | Blast | cellular component |
| protein phosphorylation | InterProScan | biological process |
| transcription factor binding | Blast | molecular function |
| membrane | Blast | cellular component |
| kinase activity | Blast | molecular function |
| nuclear speck | Blast | cellular component |
| transferase activity | Blast | molecular function |
| protein kinase binding | Blast | molecular function |
| transcription regulatory region DNA binding | Blast | molecular function |
| nucleolus | Blast | cellular component |
| intracellular part | Blast | cellular component |
| macromolecular complex | Blast | cellular component |
| cell cycle | Blast | biological process |
| molecular transducer activity | Blast | molecular function |
| intracellular non-membrane-bounded organelle | Blast | cellular component |
| nucleoplasm part | Blast | cellular component |
| nuclear body | Blast | cellular component |
| nuclear part | Blast | cellular component |
| cytoplasmic part | Blast | cellular component |
| intracellular organelle part | Blast | cellular component |
| cytoplasmic vesicle | Blast | cellular component |
| endomembrane system | Blast | cellular component |
| intracellular organelle lumen | Blast | cellular component |
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type |
|---|
GO (Blast)
39 results
| GO Term | SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae |
Type | Score | E-value |
|---|---|---|---|---|
| nucleotide binding | Hs | molecular function | 632 | 0.0 |
| RNA polymerase II core promoter proximal region sequence-specific DNA binding | Hs | molecular function | 277 | 2.19e-83 |
| transcription coactivator binding | Hs | molecular function | 277 | 2.19e-83 |
| fibrillar center | Hs | cellular component | 632 | 0.0 |
| cyclin K-CDK12 complex | Hs | cellular component | 632 | 0.0 |
| cyclin K-CDK13 complex | Hs | cellular component | 624 | 0.0 |
| DNA binding | Hs | molecular function | 277 | 2.19e-83 |
| chromatin binding | Hs | molecular function | 277 | 2.19e-83 |
| RNA binding | Hs | molecular function | 624 | 0.0 |
| protein kinase activity | Hs | molecular function | 632 | 0.0 |
| protein serine/threonine kinase activity | Hs | molecular function | 632 | 0.0 |
| cyclin-dependent protein serine/threonine kinase activity | Hs | molecular function | 632 | 0.0 |
| protein binding | Hs | molecular function | 632 | 0.0 |
| ATP binding | Hs | molecular function | 632 | 0.0 |
| extracellular region | Hs | cellular component | 624 | 0.0 |
| extracellular space | Hs | cellular component | 624 | 0.0 |
| nucleus | Hs | cellular component | 632 | 0.0 |
| nucleoplasm | Hs | cellular component | 632 | 0.0 |
| chromosome | Hs | cellular component | 632 | 0.0 |
| cytoplasm | Hs | cellular component | 277 | 2.19e-83 |
| Golgi apparatus | Hs | cellular component | 624 | 0.0 |
| cytosol | Hs | cellular component | 624 | 0.0 |
| transcription elongation factor complex | Hs | cellular component | 277 | 2.19e-83 |
| cyclin/CDK positive transcription elongation factor complex | Hs | cellular component | 632 | 0.0 |
| transcription factor binding | Hs | molecular function | 632 | 0.0 |
| RNA polymerase II carboxy-terminal domain kinase activity | Hs | molecular function | 632 | 0.0 |
| membrane | Hs | cellular component | 277 | 2.19e-83 |
| kinase activity | Hs | molecular function | 632 | 0.0 |
| PML body | Hs | cellular component | 277 | 2.19e-83 |
| nuclear speck | Hs | cellular component | 632 | 0.0 |
| transferase activity | Hs | molecular function | 632 | 0.0 |
| snRNA binding | Hs | molecular function | 277 | 2.19e-83 |
| protein kinase binding | Hs | molecular function | 632 | 0.0 |
| nuclear cyclin-dependent protein kinase holoenzyme complex | Hs | cellular component | 632 | 0.0 |
| cyclin binding | Hs | molecular function | 632 | 0.0 |
| cytoplasmic ribonucleoprotein granule | Hs | cellular component | 277 | 2.19e-83 |
| transcription regulatory region DNA binding | Hs | molecular function | 632 | 0.0 |
| 7SK snRNA binding | Hs | molecular function | 277 | 2.19e-83 |
| ficolin-1-rich granule lumen | Hs | cellular component | 624 | 0.0 |
GO (InterProScan)
3 results
| GO Term | Analysis | Type | e-value |
|---|---|---|---|
| protein kinase activity | SMART | molecular function | 1.7E-95 |
| ATP binding | SMART | molecular function | 1.7E-95 |
| protein phosphorylation | SMART | biological process | 1.7E-95 |
