Aniseed - Gene card

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000006541
NCBI Reference Sequence	XM_002128520.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl010d14

Plate: R1CiGC09f19

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

7 results

IPR Term	Analysis	Definition
Znf_MYND	ProSitePatterns	Zinc finger, MYND-type
SET_dom	ProSiteProfiles	SET domain
SET_dom	SMART	SET domain
TPR-like_helical_dom_sf	Gene3D	Tetratricopeptide-like helical domain superfamily
SET_dom	Pfam	SET domain
Znf_MYND	Pfam	Zinc finger, MYND-type
Znf_MYND	ProSiteProfiles	Zinc finger, MYND-type

GOSlim

20 results

GO Term	Annotation Origin	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Orthology	molecular function
DNA binding	Orthology	molecular function
transcription corepressor activity	Blast	molecular function
protein binding	Orthology	molecular function
nucleus	Orthology	cellular component
nucleoplasm	Orthology	cellular component
cytoplasm	Orthology	cellular component
cytosol	Orthology	cellular component
transferase activity	Orthology	molecular function
establishment of protein localization	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
metal ion binding	Orthology	molecular function
enzyme binding	Orthology	molecular function
RNA polymerase II regulatory region sequence-specific DNA binding	Orthology	molecular function
organelle organization	Orthology	biological process
regulation of catalytic activity	Orthology	biological process
protein kinase activity	Orthology	molecular function
metabolic process	Orthology	biological process
cellular protein modification process	Orthology	biological process
protein phosphorylation	Orthology	biological process

GO (Orthology)

20 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function
RNA polymerase II core binding	Hs	molecular function
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function
protein binding	Hs	molecular function
nucleus	Hs	cellular component
nucleoplasm	Hs	cellular component
cytoplasm	Hs	cellular component
cytosol	Hs	cellular component
chromatin organization	Hs	biological process
nucleosome assembly	Hs	biological process
negative regulation of protein kinase activity	Hs	biological process
methyltransferase activity	Hs	molecular function
transferase activity	Hs	molecular function
histone-lysine N-methyltransferase activity	Hs	molecular function
methylation	Hs	biological process
positive regulation of peptidyl-serine phosphorylation	Hs	biological process
histone lysine methylation	Hs	biological process
establishment of protein localization	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter	Hs	biological process
metal ion binding	Hs	molecular function

GO (Blast)

18 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	293	1.69e-95
RNA polymerase II core binding	Hs	molecular function	293	1.69e-95
RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding	Hs	molecular function	293	1.69e-95
p53 binding	Hs	molecular function	185	5.28e-54
DNA binding	Hs	molecular function	196	2.24e-57
transcription corepressor activity	Hs	molecular function	196	2.24e-57
protein binding	Hs	molecular function	293	1.69e-95
nucleus	Hs	cellular component	293	1.69e-95
nucleoplasm	Hs	cellular component	293	1.69e-95
cytoplasm	Hs	cellular component	293	1.69e-95
cytosol	Hs	cellular component	293	1.69e-95
methyltransferase activity	Hs	molecular function	293	1.69e-95
lysine N-methyltransferase activity	Hs	molecular function	185	5.28e-54
protein-lysine N-methyltransferase activity	Hs	molecular function	185	5.28e-54
transferase activity	Hs	molecular function	293	1.69e-95
histone-lysine N-methyltransferase activity	Hs	molecular function	293	1.69e-95
metal ion binding	Hs	molecular function	293	1.69e-95
histone methyltransferase activity (H3-K36 specific)	Hs	molecular function	185	5.28e-54

GO (InterProScan)

1 result

GO Term	Analysis	Type	e-value
protein binding	Gene3D	molecular function	1.1E-20

Gene Card

Best human hits

Species

Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences