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GENE CARD

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Gene Card

Best human hits

LRG1; LRRC15; LRRC70

Unique Gene ID

Cirobu.g00009943

Gene Model ID

KH2012:KH.C9.400

Location

KhC9:5514736..5517570

Transcript Models and Sequences

  KH2012:KH.C9.400.v1.A.ND1-1

External Database Gene Card

External database links

2 results

Collections

Gateway full ORF

1 result

cima811317

Plate: VES58_K02

Gene collection 1 (N. Satoh)

1 result

ciad050b22

Plate: R1CiGC05i02

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Genomicus browser link

Regulatory Regions

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

4 results

IPR Term Analysis Definition
Leu-rich_rpt Pfam Leucine-rich repeat
Leu-rich_rpt ProSiteProfiles Leucine-rich repeat
LRR_dom_sf Gene3D Leucine-rich repeat domain superfamily
Leu-rich_rpt_typical-subtyp SMART Leucine-rich repeat, typical subtype

GOSlim

19 results

GO Term Annotation Origin Type
protein binding Blast molecular function
extracellular region Blast cellular component
extracellular space Blast cellular component
cytoplasm Blast cellular component
plasma membrane Blast cellular component
membrane Blast cellular component
integral component of membrane Blast cellular component
intracellular membrane-bounded organelle Blast cellular component
extracellular exosome Blast cellular component
enzyme regulator activity Blast molecular function
protein kinase binding Blast molecular function
protein kinase activity Blast molecular function
receptor binding Blast molecular function
macromolecular complex binding Blast molecular function
extracellular region part Blast cellular component
intracellular organelle part Blast cellular component
cytoplasmic vesicle Blast cellular component
endomembrane system Blast cellular component
intracellular organelle lumen Blast cellular component

GO (Orthology)

No result

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type

GO (Blast)

20 results

GO Term SpeciesCe = Caenorhabditis elegans
Dr = Danio rerio
Dm = Drosophila melanogaster
Gg = Gallus gallus
Hs = Homo sapiens
Mm = Mus musculus
Sc = Saccharomyces cerevisiae
Type Score E-value
fibronectin binding Hs molecular function 84.7 3.31e-17
protein kinase inhibitor activity Hs molecular function 84.7 3.31e-17
interleukin-1 receptor binding Hs molecular function 79.3 1.70e-15
transforming growth factor beta receptor binding Hs molecular function 72.4 9.08e-14
protein binding Hs molecular function 84.7 3.31e-17
collagen binding Hs molecular function 84.7 3.31e-17
extracellular region Hs cellular component 72.4 9.08e-14
proteinaceous extracellular matrix Hs cellular component 79.3 1.70e-15
extracellular space Hs cellular component 79.3 1.70e-15
cytoplasm Hs cellular component 84.7 3.31e-17
plasma membrane Hs cellular component 79.3 1.70e-15
membrane Hs cellular component 84.7 3.31e-17
integral component of membrane Hs cellular component 84.7 3.31e-17
extracellular matrix Hs cellular component 84.7 3.31e-17
specific granule lumen Hs cellular component 72.4 9.08e-14
intracellular membrane-bounded organelle Hs cellular component 72.4 9.08e-14
laminin binding Hs molecular function 84.7 3.31e-17
extracellular exosome Hs cellular component 84.7 3.31e-17
tertiary granule lumen Hs cellular component 72.4 9.08e-14
ficolin-1-rich granule lumen Hs cellular component 72.4 9.08e-14

GO (InterProScan)

1 result

GO Term Analysis Type e-value
protein binding Pfam molecular function 6.3E-13