Aniseed - Gene card

Gene Card

Best human hits

UROS

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00009963

Gene Model ID

KH2012:KH.C9.419

Location

KhC9:5462831..5464855

Transcript Models and Sequences

KH2012:KH.C9.419.v1.A.ND2-1
KH2012:KH.C9.419.v1.A.SL1-1

External Database Gene Card

External database links

3 results

Database	Gene ID
ENSEMBL	ENSCING00000009611
NCBI Reference Sequence	XM_002128435.4
NCBI Reference Sequence	XM_018813456.1

Collections

Gateway full ORF

4 results

Gene collection 1 (N. Satoh)

1 result

cicl007n17

Plate: R1CiGC09m23

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

3 results

IPR Term	Analysis	Definition
4pyrrol_synth_uPrphyn_synth	CDD	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
4pyrrol_synth_uPrphyn_synth	Pfam	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase
4pyrrol_syn_uPrphyn_synt_sf	SUPERFAMILY	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily

GOSlim

20 results

GO Term	Annotation Origin	Type
mitochondrion	Blast	cellular component
cytosol	Orthology	cellular component
cofactor binding	Blast	molecular function
protein binding	Orthology	molecular function
cytoplasm	Orthology	cellular component
protein dephosphorylation	Orthology	biological process
hydrolase activity	Orthology	molecular function
extracellular exosome	Orthology	cellular component
molecular function regulator	Orthology	molecular function
transmembrane transport	Orthology	biological process
metal ion transport	Orthology	biological process
cellular response to organic substance	Orthology	biological process
protein transport	Orthology	biological process
cell-cell signaling	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
immune response	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
cell motility	Orthology	biological process
organelle organization	Orthology	biological process
catalytic activity	Blast	molecular function

GO (Orthology)

15 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
cytosol	Hs	cellular component
phosphoprotein phosphatase activity	Hs	molecular function
protein binding	Hs	molecular function
cytoplasm	Hs	cellular component
protein dephosphorylation	Hs	biological process
hydrolase activity	Hs	molecular function
calcium channel inhibitor activity	Hs	molecular function
positive regulation of insulin secretion involved in cellular response to glucose stimulus	Hs	biological process
peptidyl-histidine dephosphorylation	Hs	biological process
ion channel binding	Hs	molecular function
negative regulation of T cell receptor signaling pathway	Hs	biological process
extracellular exosome	Hs	cellular component
protein histidine phosphatase activity	Hs	molecular function
positive regulation of cell motility	Hs	biological process
regulation of actin cytoskeleton reorganization	Hs	biological process

GO (Blast)

5 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
uroporphyrinogen-III synthase activity	Hs	molecular function	154	5.71e-46
mitochondrion	Hs	cellular component	154	5.71e-46
cytosol	Hs	cellular component	154	5.71e-46
lyase activity	Hs	molecular function	154	5.71e-46
cofactor binding	Hs	molecular function	154	5.71e-46

GO (InterProScan)

2 results

GO Term	Analysis	Type	e-value
uroporphyrinogen-III synthase activity	SUPERFAMILY	molecular function	1.31E-49
tetrapyrrole biosynthetic process	SUPERFAMILY	biological process	1.31E-49