Aniseed - Gene card

Gene Card

Best human hits

TUBB2A; TUBB2B; TUBB4B

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010169

Gene Model ID

KH2012:KH.C9.606

Location

KhC9:3589421..3591463

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000006957
NCBI Reference Sequence	XM_002130279.4

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

cicl010n20

Plate: R1CiGC09l15

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

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Gene Annotations

InterPro

14 results

IPR Term	Analysis	Definition
Beta_tubulin	PRINTS	Beta tubulin
Tubulin	PRINTS	Tubulin
Tubulin_C	Gene3D	Tubulin, C-terminal
Tubulin_FtsZ_GTPase	Pfam	Tubulin/FtsZ, GTPase domain
Tubulin/FtsZ_2-layer-sand-dom	Pfam	Tubulin/FtsZ, 2-layer sandwich domain
Tubulin_CS	ProSitePatterns	Tubulin, conserved site
Tubulin/FtsZ_GTPase_sf	SUPERFAMILY	Tubulin/FtsZ, GTPase domain superfamily
Tubulin/FtsZ_GTPase_sf	Gene3D	Tubulin/FtsZ, GTPase domain superfamily
Tubulin_FtsZ_GTPase	SMART	Tubulin/FtsZ, GTPase domain
Tubulin	PANTHER	Tubulin
Tubulin/FtsZ_C_sf	Gene3D	Tubulin/FtsZ, C-terminal domain superfamily
Tubulin/FtsZ_2-layer-sand-dom	SMART	Tubulin/FtsZ, 2-layer sandwich domain
Tub_FtsZ_C	SUPERFAMILY	Tubulin/FtsZ, C-terminal
Beta_tubulin	PANTHER	Beta tubulin

GOSlim

26 results

GO Term	Annotation Origin	Type
nucleotide binding	Blast	molecular function
GTPase activity	Blast	molecular function
protein binding	Blast	molecular function
GTP binding	Blast	molecular function
extracellular region	Blast	cellular component
nucleus	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
microtubule	Blast	cellular component
microtubule-based process	InterProScan	biological process
microtubule cytoskeleton	Blast	cellular component
myelin sheath	Blast	cellular component
protein heterodimerization activity	Blast	molecular function
unfolded protein binding	Blast	molecular function
extracellular exosome	Blast	cellular component
extracellular vesicle	Blast	cellular component
RNA binding	Blast	molecular function
organelle organization	Blast	biological process
structural molecule activity	Blast	molecular function
cytoplasmic vesicle	Blast	cellular component
lysosome	Blast	cellular component
vacuolar part	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
receptor binding	Blast	molecular function

GO (Orthology)