Aniseed - Gene card

External Database Gene Card

External database links

4 results

Database	Gene ID
ENSEMBL	ENSCING00000006503
NCBI Reference Sequence	NM_001032469.1
NCBI Reference Sequence	XM_009861367.2
NCBI Reference Sequence	XM_009861368.2

Collections

Gateway full ORF

1 result

cien111024

Plate: VES87_B20

WashU Genome Browser

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Genomicus Synteny Browser

Regulatory Regions

15 results

Ci-Pax6 -2500/7000 REG00000404 [ no_output ]

Gene Phylogeny

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Gene Annotations

InterPro

13 results

IPR Term	Analysis	Definition
Paired_dom	ProSitePatterns	Paired domain
Homeobox_dom	Pfam	Homeobox domain
Paired_dom	PRINTS	Paired domain
WH-like_DNA-bd_sf	Gene3D	Winged helix-like DNA-binding domain superfamily
Homeobox_dom	ProSiteProfiles	Homeobox domain
Homeobox-like_sf	SUPERFAMILY	Homeobox-like domain superfamily
Paired_dom	SMART	Paired domain
Homeobox_CS	ProSitePatterns	Homeobox, conserved site
Paired_dom	CDD	Paired domain
Paired_dom	ProSiteProfiles	Paired domain
Homeobox_dom	CDD	Homeobox domain
Homeobox_dom	SMART	Homeobox domain
Paired_dom	Pfam	Paired domain

GOSlim

27 results

GO Term	Annotation Origin	Type
negative regulation of transcription from RNA polymerase II promoter	Blast	biological process
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Blast	molecular function
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Blast	molecular function
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Blast	molecular function
DNA binding	Blast	molecular function
chromatin binding	Blast	molecular function
double-stranded DNA binding	Blast	molecular function
transcription factor activity, sequence-specific DNA binding	Blast	molecular function
ubiquitin-protein transferase activity	Blast	molecular function
protein binding	Blast	molecular function
intracellular	Blast	cellular component
nucleus	Blast	cellular component
nucleoplasm	Blast	cellular component
cytoplasm	Blast	cellular component
cytosol	Blast	cellular component
regulation of transcription, DNA-templated	InterProScan	biological process
transcription factor binding	Blast	molecular function
membrane	Blast	cellular component
integral component of membrane	Blast	cellular component
protein kinase binding	Blast	molecular function
ubiquitin protein ligase binding	Blast	molecular function
sequence-specific DNA binding	Blast	molecular function
transcription regulatory region DNA binding	Blast	molecular function
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
RNA polymerase II regulatory region sequence-specific DNA binding	Blast	molecular function
enzyme binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

31 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
nuclear chromatin	Hs	cellular component	380	2.22e-128
RNA polymerase II core promoter proximal region sequence-specific DNA binding	Hs	molecular function	380	2.22e-128
RNA polymerase II core promoter sequence-specific DNA binding	Hs	molecular function	380	2.22e-128
RNA polymerase II distal enhancer sequence-specific DNA binding	Hs	molecular function	252	1.14e-79
RNA polymerase II transcription factor activity, sequence-specific DNA binding	Hs	molecular function	380	2.22e-128
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	Hs	molecular function	380	2.22e-128
transcriptional repressor activity, RNA polymerase II distal enhancer sequence-specific binding	Hs	molecular function	252	1.14e-79
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	380	2.22e-128
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	Hs	molecular function	380	2.22e-128
DNA binding	Hs	molecular function	380	2.22e-128
chromatin binding	Hs	molecular function	380	2.22e-128
double-stranded DNA binding	Hs	molecular function	252	1.14e-79
transcription factor activity, sequence-specific DNA binding	Hs	molecular function	380	2.22e-128
ubiquitin-protein transferase activity	Hs	molecular function	380	2.22e-128
protein binding	Hs	molecular function	380	2.22e-128
intracellular	Hs	cellular component	380	2.22e-128
nucleus	Hs	cellular component	380	2.22e-128
nucleoplasm	Hs	cellular component	380	2.22e-128
cytoplasm	Hs	cellular component	380	2.22e-128
cytosol	Hs	cellular component	380	2.22e-128
transcription factor binding	Hs	molecular function	380	2.22e-128
membrane	Hs	cellular component	380	2.22e-128
integral component of membrane	Hs	cellular component	380	2.22e-128
protein kinase binding	Hs	molecular function	380	2.22e-128
ubiquitin protein ligase binding	Hs	molecular function	380	2.22e-128
histone acetyltransferase binding	Hs	molecular function	380	2.22e-128
sequence-specific DNA binding	Hs	molecular function	380	2.22e-128
transcription regulatory region DNA binding	Hs	molecular function	380	2.22e-128
co-SMAD binding	Hs	molecular function	380	2.22e-128
R-SMAD binding	Hs	molecular function	380	2.22e-128
HMG box domain binding	Hs	molecular function	380	2.22e-128

GO (InterProScan)

3 results

GO Term	Analysis	Type	e-value
DNA binding	SMART	molecular function	5.2E-89
regulation of transcription, DNA-templated	SMART	biological process	5.2E-89
sequence-specific DNA binding	ProSitePatterns	molecular function

Gene Card

Best human hits

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Unique Gene ID

Gene Model ID

Location

Transcript Models and Sequences