Aniseed - Gene card

Gene Card

Best human hits

HSPA2; HSPA5; HSPA8

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010250

Gene Model ID

KH2012:KH.C9.680

Location

KhC9:5098744..5102887

Transcript Models and Sequences

External Database Gene Card

External database links

2 results

Database	Gene ID
ENSEMBL	ENSCING00000009590
NCBI Reference Sequence	XM_004226414.3

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

3 results

ciad069h08

Plate: R1CiGC06n24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

No result

n/a

Gene Phylogeny

You can Right Mouse Click on internal nodes, leaves and outside the tree to see multiple options adapted to your selection.
The 'History' button on the left side permits you to see the changes you have made and eventually to go back.
You can Press 'Shift' Key + Left Mouse Click on the leaf's node to access to a gene card in a new window.
You can Press 'Ctrl' Key + Left Mouse Click on nodes to do a multiple selection.

Click here to see how you can interact with this tree
Click here to see the tree inference method

Gene Annotations

InterPro

8 results

IPR Term	Analysis	Definition
Heat_shock_70_CS	ProSitePatterns	Heat shock protein 70, conserved site
HSP70_peptide-bd_sf	Gene3D	Heat shock protein 70kD, peptide-binding domain superfamily
Hsp_70_fam	PANTHER	Heat shock protein 70 family
HSP70_C_sf	SUPERFAMILY	Heat shock protein 70kD, C-terminal domain superfamily
Hsp_70_fam	Pfam	Heat shock protein 70 family
Hsp_70_fam	PRINTS	Heat shock protein 70 family
HSP70_C_sf	Gene3D	Heat shock protein 70kD, C-terminal domain superfamily
HSP70_peptide-bd_sf	SUPERFAMILY	Heat shock protein 70kD, peptide-binding domain superfamily

GOSlim

80 results

GO Term	Annotation Origin	Type
nucleotide binding	Orthology	molecular function
RNA binding	Blast	molecular function
calcium ion binding	Orthology	molecular function
protein binding	Orthology	molecular function
ATP binding	Orthology	molecular function
extracellular region	Blast	cellular component
extracellular space	Blast	cellular component
intracellular	Blast	cellular component
nucleus	Orthology	cellular component
nucleoplasm	Blast	cellular component
nucleolus	Blast	cellular component
cytoplasm	Orthology	cellular component
mitochondrion	Orthology	cellular component
lysosomal membrane	Blast	cellular component
endoplasmic reticulum	Orthology	cellular component
endoplasmic reticulum lumen	Orthology	cellular component
endoplasmic reticulum membrane	Orthology	cellular component
cytosol	Blast	cellular component
cytoskeleton	Blast	cellular component
plasma membrane	Orthology	cellular component
focal adhesion	Orthology	cellular component
protein folding	Orthology	biological process
cell surface	Orthology	cellular component
membrane	Orthology	cellular component
hydrolase activity	Orthology	molecular function
enzyme binding	Orthology	molecular function
neuron differentiation	Orthology	biological process
midbody	Orthology	cellular component
ubiquitin protein ligase binding	Orthology	molecular function
macromolecular complex	Orthology	cellular component
melanosome	Orthology	cellular component
negative regulation of apoptotic process	Orthology	biological process
myelin sheath	Orthology	cellular component
synapse	Blast	cellular component
unfolded protein binding	Orthology	molecular function
extracellular exosome	Orthology	cellular component
cytoplasmic part	Orthology	cellular component
intracellular membrane-bounded organelle	Orthology	cellular component
signal transduction	Orthology	biological process
cellular response to stress	Orthology	biological process
response to biotic stimulus	Orthology	biological process
nuclear part	Orthology	cellular component
neuron projection development	Orthology	biological process
nucleoside-triphosphatase activity	Orthology	molecular function
brain development	Orthology	biological process
integral component of membrane	Orthology	cellular component
cell migration	Orthology	biological process
response to organic substance	Orthology	biological process
proteolysis	Orthology	biological process
cell surface receptor signaling pathway	Orthology	biological process
negative regulation of signal transduction	Orthology	biological process
cellular response to organic substance	Orthology	biological process
protein ubiquitination	Orthology	biological process
endoplasmic reticulum part	Orthology	cellular component
cell communication	Orthology	biological process
macromolecular complex binding	Orthology	molecular function
cell adhesion molecule binding	Orthology	molecular function
apoptotic process	Orthology	biological process
positive regulation of transcription from RNA polymerase II promoter	Orthology	biological process
intracellular part	Blast	cellular component
intracellular non-membrane-bounded organelle	Blast	cellular component
nuclear lumen	Blast	cellular component
receptor binding	Blast	molecular function
anion binding	Blast	molecular function
endosome	Blast	cellular component
cytoskeletal part	Blast	cellular component
microtubule cytoskeleton	Blast	cellular component
intracellular organelle part	Blast	cellular component
cytoplasmic vesicle	Blast	cellular component
endomembrane system	Blast	cellular component
intracellular organelle lumen	Blast	cellular component
plasma membrane part	Blast	cellular component
lysosome	Blast	cellular component
vacuolar part	Blast	cellular component
carbohydrate derivative binding	Blast	molecular function
whole membrane	Blast	cellular component
bounding membrane of organelle	Blast	cellular component
membrane part	Blast	cellular component
synapse part	Blast	cellular component
neuron part	Blast	cellular component

GO (Orthology)

58 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type
nucleotide binding	Hs	molecular function
calcium ion binding	Hs	molecular function
protein binding	Hs	molecular function
ATP binding	Hs	molecular function
nucleus	Hs	cellular component
cytoplasm	Hs	cellular component
mitochondrion	Hs	cellular component
endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum lumen	Hs	cellular component
endoplasmic reticulum membrane	Hs	cellular component
smooth endoplasmic reticulum	Hs	cellular component
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component
plasma membrane	Hs	cellular component
focal adhesion	Hs	cellular component
ER overload response	Hs	biological process
COP9 signalosome	Hs	cellular component
response to radiation	Hs	biological process
cell surface	Hs	cellular component
positive regulation of neuron projection development	Hs	biological process
membrane	Hs	cellular component
hydrolase activity	Hs	molecular function
ATPase activity	Hs	molecular function
enzyme binding	Hs	molecular function
protein domain specific binding	Hs	molecular function
cerebellar Purkinje cell layer development	Hs	biological process
integral component of endoplasmic reticulum membrane	Hs	cellular component
neuron differentiation	Hs	biological process
positive regulation of cell migration	Hs	biological process
ubiquitin-dependent ERAD pathway	Hs	biological process
midbody	Hs	cellular component
negative regulation of transforming growth factor beta receptor signaling pathway	Hs	biological process
endoplasmic reticulum unfolded protein response	Hs	biological process
positive regulation of protein ubiquitination	Hs	biological process
ubiquitin protein ligase binding	Hs	molecular function
macromolecular complex	Hs	cellular component
endoplasmic reticulum chaperone complex	Hs	cellular component
protein folding in endoplasmic reticulum	Hs	biological process
response to endoplasmic reticulum stress	Hs	biological process
PERK-mediated unfolded protein response	Hs	biological process
ATF6-mediated unfolded protein response	Hs	biological process
cellular response to glucose starvation	Hs	biological process
response to cocaine	Hs	biological process
melanosome	Hs	cellular component
ribosome binding	Hs	molecular function
negative regulation of apoptotic process	Hs	biological process
myelin sheath	Hs	cellular component
cadherin binding	Hs	molecular function
unfolded protein binding	Hs	molecular function
chaperone binding	Hs	molecular function
neuron apoptotic process	Hs	biological process
proteolysis involved in cellular protein catabolic process	Hs	biological process
misfolded protein binding	Hs	molecular function
extracellular exosome	Hs	cellular component
cellular response to antibiotic	Hs	biological process
cellular response to calcium ion	Hs	biological process
cellular response to gamma radiation	Hs	biological process
toxin transport	Hs	biological process
positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress	Hs	biological process

GO (Blast)

69 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score
ubiquitin ligase complex	Hs	cellular component	816
nucleotide binding	Hs	molecular function	1055
synaptonemal complex	Hs	cellular component	793
Prp19 complex	Hs	cellular component	816
G-protein coupled receptor binding	Hs	molecular function	816
male germ cell nucleus	Hs	cellular component	793
phosphatidylserine binding	Hs	molecular function	816
RNA binding	Hs	molecular function	816
calcium ion binding	Hs	molecular function	1055
protein binding	Hs	molecular function	1055
ATP binding	Hs	molecular function	1055
extracellular region	Hs	cellular component	816
extracellular space	Hs	cellular component	816
intracellular	Hs	cellular component	816
nucleus	Hs	cellular component	1055
nucleoplasm	Hs	cellular component	816
spliceosomal complex	Hs	cellular component	816
nucleolus	Hs	cellular component	816
cytoplasm	Hs	cellular component	1055
mitochondrion	Hs	cellular component	1055
lysosomal membrane	Hs	cellular component	816
late endosome	Hs	cellular component	816
endoplasmic reticulum	Hs	cellular component	1055
endoplasmic reticulum lumen	Hs	cellular component	1055
endoplasmic reticulum membrane	Hs	cellular component	1055
smooth endoplasmic reticulum	Hs	cellular component	1055
endoplasmic reticulum-Golgi intermediate compartment	Hs	cellular component	1055
spindle	Hs	cellular component	793
cytosol	Hs	cellular component	816
cytoskeleton	Hs	cellular component	793
plasma membrane	Hs	cellular component	1055
focal adhesion	Hs	cellular component	1055
COP9 signalosome	Hs	cellular component	1055
cell surface	Hs	cellular component	1055
membrane	Hs	cellular component	1055
hydrolase activity	Hs	molecular function	1055
ATPase activity	Hs	molecular function	1055
enzyme binding	Hs	molecular function	1055
protein domain specific binding	Hs	molecular function	1055
MHC class II protein complex binding	Hs	molecular function	816
integral component of endoplasmic reticulum membrane	Hs	cellular component	1055
midbody	Hs	cellular component	1055
intracellular ribonucleoprotein complex	Hs	cellular component	816
heat shock protein binding	Hs	molecular function	816
ubiquitin protein ligase binding	Hs	molecular function	1055
macromolecular complex	Hs	cellular component	1055
endoplasmic reticulum chaperone complex	Hs	cellular component	1055
secretory granule lumen	Hs	cellular component	816
CatSper complex	Hs	cellular component	793
melanosome	Hs	cellular component	1055
ATPase activity, coupled	Hs	molecular function	816
ribosome binding	Hs	molecular function	1055
lysosomal lumen	Hs	cellular component	816
myelin sheath	Hs	cellular component	1055
synapse	Hs	cellular component	816
cadherin binding	Hs	molecular function	1055
unfolded protein binding	Hs	molecular function	1055
chaperone binding	Hs	molecular function	1055
misfolded protein binding	Hs	molecular function	1055
glycolipid binding	Hs	molecular function	793
C3HC4-type RING finger domain binding	Hs	molecular function	816
clathrin-sculpted gamma-aminobutyric acid transport vesicle membrane	Hs	cellular component	816
extracellular exosome	Hs	cellular component	1055
blood microparticle	Hs	cellular component	816
meiotic spindle	Hs	cellular component	793
disordered domain specific binding	Hs	molecular function	793
lumenal side of lysosomal membrane	Hs	cellular component	816
presynapse	Hs	cellular component	816
ficolin-1-rich granule lumen	Hs	cellular component	816

GO (InterProScan)