Aniseed - Gene card

Gene Card

Best human hits

FKBP10; FKBP2; FKBP9

Species

C. robusta formely Ciona int. type A

Unique Gene ID

Cirobu.g00010358

Gene Model ID

KH2012:KH.C9.778

Location

KhC9:29686..35364

Transcript Models and Sequences

KH2012:KH.C9.778.v1.A.nonSL2-1
KH2012:KH.C9.778.v1.A.SL1-1

External Database Gene Card

External database links

5 results

Database	Gene ID
ENSEMBL	ENSCING00000007014
ENSEMBL	ENSCING00000021947
ENSEMBL	ENSCING00000022304
NCBI Reference Sequence	XM_009861233.2
NCBI Reference Sequence	XM_018813371.1

Collections

Gateway full ORF

2 results

Gene collection 1 (N. Satoh)

1 result

citb3c6

Plate: R1CiGC28l24

WashU Genome Browser

Click here to view results in the tunicate WashU Browser

Genomicus Synteny Browser

Regulatory Regions

7 results

Cirobu.REG.KH2012.C9:35562-36707|Fkbp9 REG00001318 [ regulatory_region (complex_region) ]
- Cirobu.REG.KH2012.C9:35651-35962|Fkbp9 REG00001319 [ regulatory_region (enhancer) ]
  - Cirobu.REG.KH2012.C9:35651-35811|Fkbp9 REG00001320 [ regulatory_region (enhancer) ]
    - Cirobu.REG.KH2012.C9:35651-35739|Fkbp9 REG00001321 [ regulatory_region (enhancer) ]

Gene Phylogeny

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Gene Annotations

InterPro

5 results

IPR Term	Analysis	Definition
PPIase_FKBP	PANTHER	Peptidyl-prolyl cis-trans isomerase, FKBP-type
PPIase_FKBP_dom	ProSiteProfiles	FKBP-type peptidyl-prolyl cis-trans isomerase domain
EF_hand_dom	ProSiteProfiles	EF-hand domain
EF-hand-dom_pair	SUPERFAMILY	EF-hand domain pair
PPIase_FKBP_dom	Pfam	FKBP-type peptidyl-prolyl cis-trans isomerase domain

GOSlim

14 results

GO Term	Annotation Origin	Type
calcium ion binding	Blast	molecular function
protein binding	Blast	molecular function
nucleolus	Blast	cellular component
cytoplasm	Blast	cellular component
endoplasmic reticulum	Blast	cellular component
endoplasmic reticulum lumen	Blast	cellular component
endoplasmic reticulum membrane	Blast	cellular component
membrane	Blast	cellular component
metal ion binding	Blast	molecular function
extracellular exosome	Blast	cellular component
catalytic activity	Blast	molecular function
cellular protein modification process	Blast	biological process
organic cyclic compound binding	Blast	molecular function
heterocyclic compound binding	Blast	molecular function

GO (Orthology)

No result

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type

GO (Blast)

13 results

GO Term	SpeciesCe = Caenorhabditis elegans Dr = Danio rerio Dm = Drosophila melanogaster Gg = Gallus gallus Hs = Homo sapiens Mm = Mus musculus Sc = Saccharomyces cerevisiae	Type	Score	E-value
peptidyl-prolyl cis-trans isomerase activity	Hs	molecular function	529	0.0
calcium ion binding	Hs	molecular function	529	0.0
protein binding	Hs	molecular function	82.8	1.17e-18
FK506 binding	Hs	molecular function	529	0.0
nucleolus	Hs	cellular component	529	0.0
cytoplasm	Hs	cellular component	529	0.0
endoplasmic reticulum	Hs	cellular component	529	0.0
endoplasmic reticulum lumen	Hs	cellular component	529	0.0
endoplasmic reticulum membrane	Hs	cellular component	82.8	1.17e-18
membrane	Hs	cellular component	82.8	1.17e-18
isomerase activity	Hs	molecular function	529	0.0
metal ion binding	Hs	molecular function	529	0.0
extracellular exosome	Hs	cellular component	82.8	1.17e-18

GO (InterProScan)